RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 CDK10Q15131 360 aa17.5■□□□□ 0.39
CCDC9-204ENST00000599398 PRSS8Q16651 343 aa17.5■□□□□ 0.39
CCDC9-204ENST00000599398 DEFB121Q5J5C9 76 aa17.5■□□□□ 0.39
CCDC9-204ENST00000599398 ZNF66Q6ZN08 573 aa17.5■□□□□ 0.39
CCDC9-204ENST00000599398 MFSD4AQ8N468 514 aa17.5■□□□□ 0.39
CCDC9-204ENST00000599398 OR4S2Q8NH73 311 aa17.5■□□□□ 0.39
CCDC9-204ENST00000599398 TMEM68Q96MH6 324 aa17.5■□□□□ 0.39
CCDC9-204ENST00000599398 GPHA2Q96T91 129 aa17.5■□□□□ 0.39
CCDC9-204ENST00000599398 SLC5A7Q9GZV3 580 aa17.5■□□□□ 0.39
CCDC9-204ENST00000599398 NAA50Q9GZZ1 169 aaKnown RBP17.5■□□□□ 0.39
CCDC9-204ENST00000599398 ZMAT5Q9UDW3 170 aaKnown RBP17.5■□□□□ 0.39
CCDC9-204ENST00000599398 MSGN1A6NI15 193 aa17.49■□□□□ 0.39
CCDC9-204ENST00000599398 LINC01619G3V211 115 aa17.49■□□□□ 0.39
CCDC9-204ENST00000599398 CREBL2O60519 120 aaPredicted RBP17.49■□□□□ 0.39
CCDC9-204ENST00000599398 ACTL6BO94805 426 aa17.49■□□□□ 0.39
CCDC9-204ENST00000599398 DGCR2P98153 550 aa17.49■□□□□ 0.39
CCDC9-204ENST00000599398 MRGPRG-AS1Q2M3A8 158 aa17.49■□□□□ 0.39
CCDC9-204ENST00000599398 EHFQ9NZC4 300 aa17.49■□□□□ 0.39
CCDC9-204ENST00000599398 IGHV4OR15-8A0A075B7B6 117 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 A0A087WW49 117 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 SMIM31A0A1B0GVY4 71 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 H3BUA1 57 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 MPPED1O15442 326 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 PRSS3P35030 304 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 RORCP51449 518 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 SLURP1P55000 103 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 HERV-K104P61576 105 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 EIF4EBP1Q13541 118 aaPredicted RBP17.48■□□□□ 0.39
CCDC9-204ENST00000599398 TMEM17Q86X19 198 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 ANKRD13BQ86YJ7 626 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 VKORC1L1Q8N0U8 176 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 SRSF12Q8WXF0 261 aaKnown RBP17.48■□□□□ 0.39
CCDC9-204ENST00000599398 DCUN1D4Q92564 292 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 ZNF430Q9H8G1 570 aaPredicted RBP17.48■□□□□ 0.39
CCDC9-204ENST00000599398 COA4Q9NYJ1 87 aa17.48■□□□□ 0.39
CCDC9-204ENST00000599398 C13orf42A0A1B0GVH6 325 aa17.47■□□□□ 0.39
CCDC9-204ENST00000599398 APOA1P02647 267 aa17.47■□□□□ 0.39
CCDC9-204ENST00000599398 MSMO1Q15800 293 aa17.47■□□□□ 0.39
CCDC9-204ENST00000599398 GPR107Q5VW38 600 aa17.47■□□□□ 0.39
CCDC9-204ENST00000599398 MMD2Q8IY49 270 aa17.47■□□□□ 0.39
CCDC9-204ENST00000599398 GIMAP1Q8WWP7 306 aa17.47■□□□□ 0.39
CCDC9-204ENST00000599398 RHOVQ96L33 236 aa17.47■□□□□ 0.39
CCDC9-204ENST00000599398 MRPS26Q9BYN8 205 aaKnown RBP17.47■□□□□ 0.39
CCDC9-204ENST00000599398 OVOL1O14753 267 aa17.46■□□□□ 0.39
CCDC9-204ENST00000599398 GABARAPO95166 117 aa17.46■□□□□ 0.39
CCDC9-204ENST00000599398 PMP2P02689 132 aa17.46■□□□□ 0.39
CCDC9-204ENST00000599398 KIR2DS2P43631 304 aa17.46■□□□□ 0.39
CCDC9-204ENST00000599398 RFX2P48378 723 aa17.46■□□□□ 0.39
CCDC9-204ENST00000599398 CTF1Q16619 201 aa17.46■□□□□ 0.39
CCDC9-204ENST00000599398 ZBTB34Q8NCN2 500 aa17.46■□□□□ 0.39
CCDC9-204ENST00000599398 OR5H2Q8NGV7 314 aa17.46■□□□□ 0.39
CCDC9-204ENST00000599398 CMTM3Q96MX0 182 aa17.46■□□□□ 0.39
CCDC9-204ENST00000599398 A0A0G2JLM5 398 aa17.45■□□□□ 0.38
CCDC9-204ENST00000599398 HPGDSO60760 199 aa17.45■□□□□ 0.38
CCDC9-204ENST00000599398 RAMP3O60896 148 aa17.45■□□□□ 0.38
CCDC9-204ENST00000599398 HSPB1P04792 205 aaKnown RBP17.45■□□□□ 0.38
CCDC9-204ENST00000599398 TAS2R46P59540 309 aa17.45■□□□□ 0.38
CCDC9-204ENST00000599398 SNX29P2Q8IUI4 249 aa17.45■□□□□ 0.38
CCDC9-204ENST00000599398 VSTM2AQ8TAG5 236 aa17.45■□□□□ 0.38
CCDC9-204ENST00000599398 DLX4Q92988 240 aaPredicted RBP17.45■□□□□ 0.38
CCDC9-204ENST00000599398 SCOCQ9UIL1 159 aa17.45■□□□□ 0.38
CCDC9-204ENST00000599398 ANAPC10Q9UM13 185 aa17.45■□□□□ 0.38
CCDC9-204ENST00000599398 SULT1C2O00338 296 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 OR2A4O95047 310 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 HRASP01112 189 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 ELK1P19419 428 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 ECI1P42126 302 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 BRWD1-AS2P59051 145 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 DEFA5Q01523 94 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 CATR1Q13166 79 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 DYRK1AQ13627 763 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 C10orf55Q5SWW7 151 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 MZT2AQ6P582 158 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 ZNF818PQ6ZRF7 136 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 SSX9Q7RTT3 188 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 GPR141Q7Z602 305 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 SPAG16Q8N0X2 631 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 OR2A7Q96R45 310 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 SPIN2AQ99865 258 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 SPIN2BQ9BPZ2 258 aa17.44■□□□□ 0.38
CCDC9-204ENST00000599398 ZNF2Q9BSG1 426 aaPredicted RBP17.44■□□□□ 0.38
CCDC9-204ENST00000599398 TINAGL1Q9GZM7 467 aaPredicted RBP17.44■□□□□ 0.38
CCDC9-204ENST00000599398 FAM25AB3EWG3 89 aa17.43■□□□□ 0.38
CCDC9-204ENST00000599398 FAM25CB3EWG5 89 aa17.43■□□□□ 0.38
CCDC9-204ENST00000599398 FAM25GB3EWG6 89 aa17.43■□□□□ 0.38
CCDC9-204ENST00000599398 KBTBD11O94819 623 aa17.43■□□□□ 0.38
CCDC9-204ENST00000599398 OR9G9P0C7N8 305 aa17.43■□□□□ 0.38
CCDC9-204ENST00000599398 NAT1P18440 290 aa17.43■□□□□ 0.38
CCDC9-204ENST00000599398 AP3S1Q92572 193 aa17.43■□□□□ 0.38
CCDC9-204ENST00000599398 ANKRD34BA5PLL1 514 aa17.42■□□□□ 0.38
CCDC9-204ENST00000599398 SAP30O75446 220 aa17.42■□□□□ 0.38
CCDC9-204ENST00000599398 HLA-DMAP28067 261 aa17.42■□□□□ 0.38
CCDC9-204ENST00000599398 INSL3P51460 131 aa17.42■□□□□ 0.38
CCDC9-204ENST00000599398 AADACL3Q5VUY0 350 aa17.42■□□□□ 0.38
CCDC9-204ENST00000599398 DHRS11Q6UWP2 260 aa17.42■□□□□ 0.38
CCDC9-204ENST00000599398 ADAD2Q8NCV1 583 aaKnown RBP17.42■□□□□ 0.38
CCDC9-204ENST00000599398 OR51H1Q8NH63 302 aa17.42■□□□□ 0.38
CCDC9-204ENST00000599398 GPX8Q8TED1 209 aa17.42■□□□□ 0.38
CCDC9-204ENST00000599398 BORCS5Q969J3 196 aa17.42■□□□□ 0.38
CCDC9-204ENST00000599398 SORL1Q92673 2214 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms