RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 C1RLQ9NZP8 487 aa8.57□□□□□ -1.04
SMAD4-214ENST00000592186 SOX21Q9Y651 276 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-214ENST00000592186 MXRA5Q9NR99 2828 aa8.57□□□□□ -1.04
SMAD4-214ENST00000592186 KRBOX1C9JBD0 128 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 H0Y980 276 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 H3BUX3 64 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 M0QZK8 103 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 VENTXO95231 258 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 HPRT1P00492 218 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 HRASP01112 189 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 IGKV1D-33P01593 117 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 IGKV1-33P01594 117 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 SNRNP70P08621 437 aaKnown RBP8.56□□□□□ -1.04
SMAD4-214ENST00000592186 MECP2P51608 486 aaKnown RBP8.56□□□□□ -1.04
SMAD4-214ENST00000592186 RRAS2P62070 204 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-214ENST00000592186 RPL30P62888 115 aaKnown RBP8.56□□□□□ -1.04
SMAD4-214ENST00000592186 SRPXP78539 464 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 TMEM177Q53S58 311 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 TEX261Q6UWH6 196 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 COMMD7Q86VX2 200 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 OR51H1Q8NH63 302 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 GALNT14Q96FL9 552 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 EAF1Q96JC9 268 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-214ENST00000592186 ZNF48Q96MX3 618 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-214ENST00000592186 TSNAXQ99598 290 aaKnown RBP8.56□□□□□ -1.04
SMAD4-214ENST00000592186 MARVELD1Q9BSK0 173 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 C20orf85Q9H1P6 137 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 NAA60Q9H7X0 242 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 TCF19Q9Y242 345 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 U3KQ87 197 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 TLN2Q9Y4G6 2542 aa8.56□□□□□ -1.04
SMAD4-214ENST00000592186 TRAV6A0A075B6T7 132 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 IGHV3-72A0A0B4J1Y9 119 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 MDFIC2A0A1B0GVS7 189 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 A6NDX4 124 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 ARPC1BO15143 372 aaKnown RBP8.55□□□□□ -1.04
SMAD4-214ENST00000592186 HOXA3O43365 443 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-214ENST00000592186 PEX14O75381 377 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 DHFRP00374 187 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 IGHV4-59P01825 116 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 TMEM11P17152 192 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 PAX6P26367 422 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 HOXA1P49639 335 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-214ENST00000592186 LINC00205P59089 165 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 RAB14P61106 215 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 RPS16P62249 146 aaKnown RBP8.55□□□□□ -1.04
SMAD4-214ENST00000592186 CD83Q01151 205 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 LAMTOR1Q6IAA8 161 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 GLDNQ6ZMI3 551 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-214ENST00000592186 ADAD2Q8NCV1 583 aaKnown RBP8.55□□□□□ -1.04
SMAD4-214ENST00000592186 RBM14Q96PK6 669 aaKnown RBP8.55□□□□□ -1.04
SMAD4-214ENST00000592186 GPHA2Q96T91 129 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 TMEM222Q9H0R3 208 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 VPREB3Q9UKI3 123 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 HSPB11Q9Y547 144 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 F8P00451 2351 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 NAV3Q8IVL0 2385 aa8.55□□□□□ -1.04
SMAD4-214ENST00000592186 RPS10-NUDT3A0A1W2PQS6 291 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 INMT-MINDY4F8WBC2 141 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 TCF21O43680 179 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 PRAF2O60831 178 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 OR2F2O95006 317 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 SPDEFO95238 335 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 CDS2O95674 445 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 IGKV1-16P04430 117 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 OR4E1P0C645 316 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 NQO2P16083 231 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 UCP1P25874 307 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 LPAR6P43657 344 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 BRWD1-AS2P59051 145 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 HILS1P60008 231 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 RPL15P61313 204 aaKnown RBP8.54□□□□□ -1.04
SMAD4-214ENST00000592186 HNF4GQ14541 408 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 SLC9A3R2Q15599 337 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 C4orf46Q504U0 113 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 Q8N6K4 173 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 NPBQ8NG41 125 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 VSTM2AQ8TAG5 236 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 IL22RA2Q969J5 263 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 TMEM230Q96A57 120 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 GPN1Q9HCN4 374 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-214ENST00000592186 COMMD9Q9P000 198 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 MBD2Q9UBB5 411 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 UBQLN2Q9UHD9 624 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 FLVCR2Q9UPI3 526 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 A0A0B4J293 547 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 C9orf170A2RU37 121 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 ZNF98A6NK75 572 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 NCBP2LA6PVI3 153 aaKnown RBP8.54□□□□□ -1.04
SMAD4-214ENST00000592186 FGF16O43320 207 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 SFT2D2O95562 160 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 IL5P05113 134 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 OR5AC1P0C628 307 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 ANXA7P20073 488 aaKnown RBP8.54□□□□□ -1.04
SMAD4-214ENST00000592186 VAMP1P23763 118 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 CD24P25063 80 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 ERVK-16P61578 105 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 POU2AF1Q16633 256 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 TATDN3Q17R31 274 aa8.54□□□□□ -1.04
SMAD4-214ENST00000592186 SP6Q3SY56 376 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms