RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 SPG11Q96JI7 2443 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 ABCA2Q9BZC7 2435 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 IGHV1-3A0A0C4DH29 117 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 RNASEK-C17orf49H0YIS7 233 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 LY6LH3BQJ8 138 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 CHST1O43916 411 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 RBMXL2O75526 392 aaKnown RBP9.24□□□□□ -0.93
SMAD4-205ENST00000588745 MED6O75586 246 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 TMEM50AO95807 157 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 GAPDHP04406 335 aaKnown RBP9.24□□□□□ -0.93
SMAD4-205ENST00000588745 HTR1DP28221 377 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 MC5RP33032 325 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 CAV2P51636 162 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 OR2B8PP59922 312 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 UBA52P62987 128 aaKnown RBP9.24□□□□□ -0.93
SMAD4-205ENST00000588745 RELBQ01201 579 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 TNFRSF9Q07011 255 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 DEFB113Q30KQ7 82 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 TPTE2P1Q5T6R2 138 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 GPR157Q5UAW9 335 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 OR4A47Q6IF82 309 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 TEX261Q6UWH6 196 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 ZNF767PQ75MW2 155 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 OR2C3Q8N628 320 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 OR8H1Q8NGG4 311 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 OR4A16Q8NH70 328 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 HARBI1Q96MB7 349 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 TBX15Q96SF7 602 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 AIFM2Q9BRQ8 373 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 ZNF471Q9BX82 626 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-205ENST00000588745 LPAR2Q9HBW0 351 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 ZC4H2Q9NQZ6 224 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 INSIG2Q9Y5U4 225 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 U3KQ87 197 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 DOPEY2Q9Y3R5 2298 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 PTPN13Q12923 2485 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 A0A1W2PPI3 338 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 IGSF23A1L1A6 192 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 FAM24AA6NFZ4 105 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 C15orf61A6NNL5 157 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 LEUTXA8MZ59 168 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 SHOXO15266 292 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 TOX4O94842 621 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 IAPPP10997 89 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 PAX9P55771 341 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 UBE2KP61086 200 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 RPL23AP62750 156 aaKnown RBP9.23□□□□□ -0.93
SMAD4-205ENST00000588745 EWSR1Q01844 656 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMAD4-205ENST00000588745 LDLRAD2Q5SZI1 272 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 OR4C13Q8NGP0 309 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 LHX4Q969G2 390 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 FLYWCH2Q96CP2 140 aaKnown RBP9.23□□□□□ -0.93
SMAD4-205ENST00000588745 RBMXL1Q96E39 390 aaKnown RBP9.23□□□□□ -0.93
SMAD4-205ENST00000588745 QTRT1Q9BXR0 403 aaKnown RBP9.23□□□□□ -0.93
SMAD4-205ENST00000588745 RBKSQ9H477 322 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 DPM3Q9P2X0 92 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 FBXL17Q9UF56 701 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 WSB1Q9Y6I7 421 aa9.23□□□□□ -0.93
SMAD4-205ENST00000588745 ANKRD17O75179 2603 aaKnown RBP9.22□□□□□ -0.93
SMAD4-205ENST00000588745 HELZ2Q9BYK8 2649 aaKnown RBP9.22□□□□□ -0.93
SMAD4-205ENST00000588745 TRAV3A0A0B4J244 114 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 SRRM4A7MD48 611 aaKnown RBP9.22□□□□□ -0.93
SMAD4-205ENST00000588745 TAAR5O14804 337 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 SPDEFO95238 335 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 IFNA7P01567 189 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 IL6RP08887 468 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-205ENST00000588745 SAA1P0DJI8 122 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-205ENST00000588745 USF1P22415 310 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-205ENST00000588745 CEACAM3P40198 252 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 TAS2R30P59541 319 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 EXOSC2Q13868 293 aaKnown RBP9.22□□□□□ -0.93
SMAD4-205ENST00000588745 ZNF429Q86V71 674 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 PDZD9Q8IXQ8 264 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 PUSL1Q8N0Z8 303 aaKnown RBP9.22□□□□□ -0.93
SMAD4-205ENST00000588745 TMEM252Q8N6L7 170 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 ZNF680Q8NEM1 530 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 OR52E5Q8NH55 327 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 DTD1Q8TEA8 209 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 ST8SIA2Q92186 375 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 MS4A7Q9GZW8 240 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-205ENST00000588745 SLC25A31Q9H0C2 315 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 CYTL1Q9NRR1 136 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 BET1LQ9NYM9 111 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 PAIP2BQ9ULR5 123 aaKnown RBP9.22□□□□□ -0.93
SMAD4-205ENST00000588745 TACC2O95359 2948 aa9.22□□□□□ -0.93
SMAD4-205ENST00000588745 CRYBG3Q68DQ2 2970 aa9.21□□□□□ -0.93
SMAD4-205ENST00000588745 NBPF19A0A087WUL8 3843 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 A0A096LNT2 108 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 IGHV3-72A0A0B4J1Y9 119 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 A0A1W2PRD5 423 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 A0A1W2PRF3 423 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 A0A1W2PRM7 423 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 H3BP45 60 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 UPK2O00526 184 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 KBTBD11O94819 623 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 CFDP00746 253 aaPredicted RBP9.21□□□□□ -0.94
SMAD4-205ENST00000588745 UBE2E1P51965 193 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 SPCS3P61009 180 aa9.21□□□□□ -0.94
SMAD4-205ENST00000588745 RPS16P62249 146 aaKnown RBP9.21□□□□□ -0.94
SMAD4-205ENST00000588745 PAX8Q06710 450 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms