RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SSX3Q99909 188 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 PLSCR4Q9NRQ2 329 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 EXPH5Q8NEV8 1989 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 IGKV1D-17A0A075B6S4 117 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 TGIF2-C20orf24A0A0A6YYL0 155 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 K7N7A8 449 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 IGKV3-15P01624 115 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 MT-ND4LP03901 98 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 ADH4P08319 380 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 RTP5Q14D33 572 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 ACOT6Q3I5F7 207 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-217ENST00000584582 FAM216AQ8WUB2 273 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 ZNF251Q9BRH9 671 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 GP6Q9HCN6 339 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 SLC25A15Q9Y619 301 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 ZFHX4Q86UP3 3567 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 IGHG3P01860 377 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 PAX6P26367 422 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 FAM90A1Q86YD7 464 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 COMMD1Q8N668 190 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 ZNF525Q8N782 197 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 HIST1H2BAQ96A08 127 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 SNX22Q96L94 193 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 HARBI1Q96MB7 349 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 hADV38S2A0JD32 116 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 ZNF705GA8MUZ8 300 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-217ENST00000584582 CCL21O00585 134 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 OR9G9P0C7N8 305 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 CD1BP29016 333 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 CHRNB4P30926 498 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 ACSM6Q6P461 480 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 LHFPL4Q7Z7J7 247 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 ZNF561Q8N587 486 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 OR51G1Q8NGK1 321 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 OR13D1Q8NGV5 346 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 OR4S2Q8NH73 311 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 CA5BP1Q8WTZ4 195 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 DKK4Q9UBT3 224 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 TM4SF5O14894 197 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 OR10J4P0C629 311 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 BCL2P10415 239 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 PAX9P55771 341 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 MSMPQ1L6U9 139 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 FAM78BQ5VT40 261 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 ASCL5Q7RTU5 278 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 PIP4P1Q86T03 277 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 DUXBA0A1W2PPF3 345 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 J3QR06 171 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 CNIH1O95406 144 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 LRRC10Q5BKY1 277 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 RBMXL3Q8N7X1 1067 aaKnown RBP9.41□□□□□ -0.9
TOP3A-217ENST00000584582 OR4P4Q8NGL7 312 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 PRR7Q8TB68 274 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 WDR61Q9GZS3 305 aaKnown RBP9.41□□□□□ -0.9
TOP3A-217ENST00000584582 ONECUT1Q9UBC0 465 aa9.41□□□□□ -0.9
TOP3A-217ENST00000584582 CARHSP1Q9Y2V2 147 aaKnown RBP9.41□□□□□ -0.9
TOP3A-217ENST00000584582 C11orf94C9JXX5 98 aa9.4□□□□□ -0.9
TOP3A-217ENST00000584582 HCP5Q6MZN7 132 aa9.4□□□□□ -0.9
TOP3A-217ENST00000584582 C22orf34Q6ZV56 151 aa9.4□□□□□ -0.9
TOP3A-217ENST00000584582 FAM215AQ9Y5M1 114 aa9.4□□□□□ -0.9
TOP3A-217ENST00000584582 PGPEP1LA6NFU8 196 aa9.4□□□□□ -0.9
TOP3A-217ENST00000584582 PPIHO43447 177 aaKnown RBP9.4□□□□□ -0.9
TOP3A-217ENST00000584582 CD5P06127 495 aa9.4□□□□□ -0.9
TOP3A-217ENST00000584582 LYL1P12980 280 aa9.4□□□□□ -0.9
TOP3A-217ENST00000584582 OPRK1P41145 380 aa9.4□□□□□ -0.9
TOP3A-217ENST00000584582 THBS3P49746 956 aa9.4□□□□□ -0.9
TOP3A-217ENST00000584582 PRR27Q6MZM9 219 aa9.4□□□□□ -0.9
TOP3A-217ENST00000584582 DOLPP1Q86YN1 238 aa9.4□□□□□ -0.9
TOP3A-217ENST00000584582 RAB9BQ9NP90 201 aa9.4□□□□□ -0.9
TOP3A-217ENST00000584582 PPIAL4EA0A075B759 164 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 BTBD17A6NE02 478 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 PPIAL4DF5H284 164 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 IGHV1-46P01743 117 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 TRGC2P03986 189 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 PPIAL4FP0DN26 164 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 NPY1RP25929 384 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 B2MP61769 119 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 DAZAP2Q15038 168 aaPredicted RBP9.4□□□□□ -0.91
TOP3A-217ENST00000584582 RNF212Q495C1 297 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 MORN2Q502X0 79 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 TMEM41BQ5BJD5 291 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 SPACA3Q8IXA5 215 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 LSM10Q969L4 123 aaKnown RBP9.4□□□□□ -0.91
TOP3A-217ENST00000584582 MISP3Q96FF7 219 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 SGK494Q96LW2 274 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 LPAR2Q9HBW0 351 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 TCF19Q9Y242 345 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 PPIAL4AQ9Y536 164 aa9.4□□□□□ -0.91
TOP3A-217ENST00000584582 ARHGAP32A7KAX9 2087 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 PPP5D1E7EU14 171 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 RRHO14718 337 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 RAB29O14966 203 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-217ENST00000584582 TCF15Q12870 199 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 TMEM241Q24JQ0 296 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 HFEQ30201 348 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 KRTAP27-1Q3LI81 207 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 FAM210BQ96KR6 192 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 POLQO75417 2590 aa9.39□□□□□ -0.91
TOP3A-217ENST00000584582 ZZEF1O43149 2961 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms