RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 IGKV1-13P0DP09 117 aa12.16□□□□□ -0.46
CRLF3-203ENST00000578692 RPL30P62888 115 aaKnown RBP12.16□□□□□ -0.46
CRLF3-203ENST00000578692 DYRK1AQ13627 763 aa12.16□□□□□ -0.46
CRLF3-203ENST00000578692 CDK10Q15131 360 aa12.16□□□□□ -0.46
CRLF3-203ENST00000578692 KCTD9Q7L273 389 aa12.16□□□□□ -0.46
CRLF3-203ENST00000578692 HAPLN4Q86UW8 402 aa12.16□□□□□ -0.46
CRLF3-203ENST00000578692 ADAD2Q8NCV1 583 aaKnown RBP12.16□□□□□ -0.46
CRLF3-203ENST00000578692 RNF167Q9H6Y7 350 aa12.16□□□□□ -0.46
CRLF3-203ENST00000578692 ZNF430Q9H8G1 570 aaPredicted RBP12.16□□□□□ -0.46
CRLF3-203ENST00000578692 MRPS7Q9Y2R9 242 aaKnown RBP12.16□□□□□ -0.46
CRLF3-203ENST00000578692 LOC100506127A0A0U1RQW1 187 aa12.15□□□□□ -0.46
CRLF3-203ENST00000578692 CREBL2O60519 120 aaPredicted RBP12.15□□□□□ -0.46
CRLF3-203ENST00000578692 FRMD6-AS1P0C7T7 363 aa12.15□□□□□ -0.46
CRLF3-203ENST00000578692 SCAND1P57086 179 aa12.15□□□□□ -0.46
CRLF3-203ENST00000578692 TATDN3Q17R31 274 aa12.15□□□□□ -0.46
CRLF3-203ENST00000578692 IDNKQ5T6J7 187 aa12.15□□□□□ -0.46
CRLF3-203ENST00000578692 MMD2Q8IY49 270 aa12.15□□□□□ -0.46
CRLF3-203ENST00000578692 OR9G4Q8NGQ1 327 aa12.15□□□□□ -0.46
CRLF3-203ENST00000578692 OR5H6Q8NGV6 325 aa12.15□□□□□ -0.46
CRLF3-203ENST00000578692 HSD17B10Q99714 261 aaKnown RBP12.15□□□□□ -0.46
CRLF3-203ENST00000578692 TRAV18A0A075B6X5 111 aa12.14□□□□□ -0.47
CRLF3-203ENST00000578692 RBMXL2O75526 392 aaKnown RBP12.14□□□□□ -0.47
CRLF3-203ENST00000578692 TRBV12-3P01733 135 aa12.14□□□□□ -0.47
CRLF3-203ENST00000578692 SYNJ2BPP57105 145 aa12.14□□□□□ -0.47
CRLF3-203ENST00000578692 OR2B11Q5JQS5 317 aa12.14□□□□□ -0.47
CRLF3-203ENST00000578692 MFSD4AQ8N468 514 aa12.14□□□□□ -0.47
CRLF3-203ENST00000578692 SPIN2AQ99865 258 aa12.14□□□□□ -0.47
CRLF3-203ENST00000578692 SPIN2BQ9BPZ2 258 aa12.14□□□□□ -0.47
CRLF3-203ENST00000578692 SPATA2Q9UM82 520 aa12.14□□□□□ -0.47
CRLF3-203ENST00000578692 ETV7Q9Y603 341 aa12.14□□□□□ -0.47
CRLF3-203ENST00000578692 PRH1P02810 166 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 ARPC4P59998 168 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 EIF4EBP1Q13541 118 aaPredicted RBP12.13□□□□□ -0.47
CRLF3-203ENST00000578692 NEDD8Q15843 81 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 RPEL1Q2QD12 228 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 IL34Q6ZMJ4 242 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 Q8N1Y9 231 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 GVQW1Q8N7I0 195 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 BEST4Q8NFU0 473 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 TCTEX1D2Q8WW35 142 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 SNAPC3Q92966 411 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 SLC25A38Q96DW6 304 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 AKIP1Q9NQ31 210 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 ADAM30Q9UKF2 790 aa12.13□□□□□ -0.47
CRLF3-203ENST00000578692 A0A0A6YYH2 397 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 TRBV9A0A0B4J1U6 114 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 A6NJ64 397 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 FAM223BA6NKX1 122 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 H0Y980 276 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 OR2A4O95047 310 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 RHOGP84095 191 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 ATP5G2Q06055 141 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 ZNF66Q6ZN08 573 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 HOGA1Q86XE5 327 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 FAM223AQ8IWN6 122 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 OR4S2Q8NH73 311 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 VSTM2AQ8TAG5 236 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 RCHY1Q96PM5 261 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 OR2A7Q96R45 310 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 DIABLOQ9NR28 239 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 TAS2R8Q9NYW2 309 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 TNCP24821 2201 aa12.12□□□□□ -0.47
CRLF3-203ENST00000578692 FCGR2CP31995 323 aa12.11□□□□□ -0.47
CRLF3-203ENST00000578692 BRWD1-AS2P59051 145 aa12.11□□□□□ -0.47
CRLF3-203ENST00000578692 ZNF45Q02386 682 aa12.11□□□□□ -0.47
CRLF3-203ENST00000578692 C10orf55Q5SWW7 151 aa12.11□□□□□ -0.47
CRLF3-203ENST00000578692 SLC25A42Q86VD7 318 aa12.11□□□□□ -0.47
CRLF3-203ENST00000578692 ZMAT4Q9H898 229 aa12.11□□□□□ -0.47
CRLF3-203ENST00000578692 CCL28Q9NRJ3 127 aa12.11□□□□□ -0.47
CRLF3-203ENST00000578692 KMT2CQ8NEZ4 4911 aaKnown RBP12.11□□□□□ -0.47
CRLF3-203ENST00000578692 HMX3A6NHT5 357 aa12.1□□□□□ -0.47
CRLF3-203ENST00000578692 C3orf84H3BNL1 204 aa12.1□□□□□ -0.47
CRLF3-203ENST00000578692 KBTBD11O94819 623 aa12.1□□□□□ -0.47
CRLF3-203ENST00000578692 CSN3P07498 182 aa12.1□□□□□ -0.47
CRLF3-203ENST00000578692 IGHV4-30-4P0DP06 118 aa12.1□□□□□ -0.47
CRLF3-203ENST00000578692 PTHLHP12272 177 aa12.1□□□□□ -0.47
CRLF3-203ENST00000578692 KCTD21Q4G0X4 260 aa12.1□□□□□ -0.47
CRLF3-203ENST00000578692 PUSL1Q8N0Z8 303 aaKnown RBP12.1□□□□□ -0.47
CRLF3-203ENST00000578692 NECAP1Q8NC96 275 aa12.1□□□□□ -0.47
CRLF3-203ENST00000578692 TMEM167AQ8TBQ9 72 aa12.1□□□□□ -0.47
CRLF3-203ENST00000578692 SECTM1Q8WVN6 248 aa12.1□□□□□ -0.47
CRLF3-203ENST00000578692 GPHA2Q96T91 129 aa12.1□□□□□ -0.47
CRLF3-203ENST00000578692 AUNIPQ9H7T9 357 aa12.1□□□□□ -0.47
CRLF3-203ENST00000578692 SIGLEC8Q9NYZ4 499 aa12.1□□□□□ -0.47
CRLF3-203ENST00000578692 HUWE1Q7Z6Z7 4374 aaKnown RBP12.09□□□□□ -0.47
CRLF3-203ENST00000578692 A8MZ25 164 aa12.09□□□□□ -0.47
CRLF3-203ENST00000578692 E7EUB6 86 aa12.09□□□□□ -0.47
CRLF3-203ENST00000578692 TMEM127O75204 238 aa12.09□□□□□ -0.47
CRLF3-203ENST00000578692 HRASP01112 189 aa12.09□□□□□ -0.47
CRLF3-203ENST00000578692 MAS1LP35410 378 aa12.09□□□□□ -0.47
CRLF3-203ENST00000578692 RPL27AP46776 148 aaKnown RBP12.09□□□□□ -0.47
CRLF3-203ENST00000578692 EXOSC2Q13868 293 aaKnown RBP12.09□□□□□ -0.47
CRLF3-203ENST00000578692 MSMO1Q15800 293 aa12.09□□□□□ -0.47
CRLF3-203ENST00000578692 SGPP2Q8IWX5 399 aa12.09□□□□□ -0.47
CRLF3-203ENST00000578692 ZBTB34Q8NCN2 500 aa12.09□□□□□ -0.47
CRLF3-203ENST00000578692 OR13F1Q8NGS4 319 aa12.09□□□□□ -0.47
CRLF3-203ENST00000578692 C19orf73Q9NVV2 129 aa12.09□□□□□ -0.47
CRLF3-203ENST00000578692 PEMTQ9UBM1 199 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms