RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 MDFIC2A0A1B0GVS7 189 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 F5H0A9 414 aaPredicted RBP8.26□□□□□ -1.09
SS18-207ENST00000577636 TOR1AO14656 332 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 TAAR5O14804 337 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 RBFOX2O43251 390 aaKnown RBP eCLIP8.26□□□□□ -1.09
SS18-207ENST00000577636 BCL2L11O43521 198 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 MBPP02686 304 aaPredicted RBP8.26□□□□□ -1.09
SS18-207ENST00000577636 CRYBA1P05813 215 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 THBS3P49746 956 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 GNG10P50151 68 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 ERVK-16P61578 105 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 GNB2P62879 340 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 IFITM2Q01629 132 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 TAGLNQ01995 201 aaKnown RBP8.26□□□□□ -1.09
SS18-207ENST00000577636 ZNF273Q14593 569 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 NMSQ5H8A3 153 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 HIST2H2BDQ6DRA6 164 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 TEX261Q6UWH6 196 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 H2BFWTQ7Z2G1 175 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 C8orf31Q8N9H6 132 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 OR4D5Q8NGN0 318 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 OR10X1Q8NGY0 326 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 ZDHHC16Q969W1 377 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 ARPC5LQ9BPX5 153 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 AIFM2Q9BRQ8 373 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 IFI27L2Q9H2X8 130 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 CACFD1Q9UGQ2 172 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 UBQLN2Q9UHD9 624 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 MMP24Q9Y5R2 645 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 U3KQ87 197 aa8.26□□□□□ -1.09
SS18-207ENST00000577636 PPIAL4CA0A0B4J2A2 164 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 GPR137BO60478 399 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 RBMXL2O75526 392 aaKnown RBP8.25□□□□□ -1.09
SS18-207ENST00000577636 HPRT1P00492 218 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 KRASP01116 189 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 IGHV3-7P01780 117 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 RBP4P02753 201 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 LIPFP07098 398 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 PPIAL4GP0DN37 164 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 IGHV4-38-2P0DP08 117 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 MMP9P14780 707 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 CCL3L1P16619 93 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 RPL12P30050 165 aaKnown RBP8.25□□□□□ -1.09
SS18-207ENST00000577636 DUTP33316 252 aaKnown RBP8.25□□□□□ -1.09
SS18-207ENST00000577636 P2RY1P47900 373 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 PRRX1P54821 245 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 RPL23AP62750 156 aaKnown RBP8.25□□□□□ -1.09
SS18-207ENST00000577636 ZNF816Q0VGE8 651 aaPredicted RBP8.25□□□□□ -1.09
SS18-207ENST00000577636 RTL8BQ17RB0 113 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 CT45A1Q5HYN5 189 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 OR2B11Q5JQS5 317 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 GPR157Q5UAW9 335 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 SLC25A48Q6ZT89 311 aaKnown RBP8.25□□□□□ -1.09
SS18-207ENST00000577636 TCF23Q7RTU1 214 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 FGFRL1Q8N441 504 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 OR4S2Q8NH73 311 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 OR9G1Q8NH87 305 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 CT45A3Q8NHU0 189 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 TNFRSF14Q92956 283 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 LEAP2Q969E1 77 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 AQP10Q96PS8 301 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 RNF126Q9BV68 326 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 ZNF471Q9BX82 626 aaPredicted RBP8.25□□□□□ -1.09
SS18-207ENST00000577636 SLC25A31Q9H0C2 315 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 PATZ1Q9HBE1 687 aaKnown RBP8.25□□□□□ -1.09
SS18-207ENST00000577636 INSIG2Q9Y5U4 225 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 SESN1Q9Y6P5 492 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 CMYA5Q8N3K9 4069 aa8.25□□□□□ -1.09
SS18-207ENST00000577636 PKD1L1Q8TDX9 2849 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 SAA2-SAA4A0A096LPE2 208 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 FAM181BA6NEQ2 426 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 C17orf98A8MV24 154 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 FAM90A26D6RGX4 464 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 HOXA3O43365 443 aaPredicted RBP8.24□□□□□ -1.09
SS18-207ENST00000577636 SSSCA1O60232 199 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 FCGR3BO75015 233 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 MED6O75586 246 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 APOA2P02652 100 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 SAA2P0DJI9 122 aaPredicted RBP8.24□□□□□ -1.09
SS18-207ENST00000577636 RRASP10301 218 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 TPT1P13693 172 aaKnown RBP8.24□□□□□ -1.09
SS18-207ENST00000577636 CAV2P51636 162 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 ARHGDIBP52566 201 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 ZNF134P52741 427 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 RPL30P62888 115 aaKnown RBP8.24□□□□□ -1.09
SS18-207ENST00000577636 ZNF585BQ52M93 769 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 RPL39P5Q59GN2 51 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 WDR25Q64LD2 544 aaPredicted RBP8.24□□□□□ -1.09
SS18-207ENST00000577636 EIF5AL1Q6IS14 154 aaKnown RBP8.24□□□□□ -1.09
SS18-207ENST00000577636 FAM53AQ6NSI3 398 aaPredicted RBP8.24□□□□□ -1.09
SS18-207ENST00000577636 ZNF439Q8NDP4 499 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 ZNF680Q8NEM1 530 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 GPR146Q96CH1 333 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 CLCC1Q96S66 551 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 SSBP3Q9BWW4 388 aaPredicted RBP8.24□□□□□ -1.09
SS18-207ENST00000577636 TMEM133Q9H2Q1 129 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.24□□□□□ -1.09
SS18-207ENST00000577636 COA4Q9NYJ1 87 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 OR5AC2Q9NZP5 309 aa8.24□□□□□ -1.09
SS18-207ENST00000577636 ONECUT1Q9UBC0 465 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms