RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 RBMX2Q9Y388 322 aaKnown RBP13.25□□□□□ -0.29
LITAF-211ENST00000572255 PRELID3BQ9Y3B1 194 aa13.25□□□□□ -0.29
LITAF-211ENST00000572255 RYR3Q15413 4870 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 HUWE1Q7Z6Z7 4374 aaKnown RBP13.24□□□□□ -0.29
LITAF-211ENST00000572255 IGKV1D-13A0A0B4J2D9 117 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 CREBL2O60519 120 aaPredicted RBP13.24□□□□□ -0.29
LITAF-211ENST00000572255 TUSC2O75896 110 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 SLC22A5O76082 557 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 TRBV12-3P01733 135 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 IGKV1-13P0DP09 117 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 CD36P16671 472 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 SYNJ2BPP57105 145 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 RPL30P62888 115 aaKnown RBP13.24□□□□□ -0.29
LITAF-211ENST00000572255 MXD1Q05195 221 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 OR2B11Q5JQS5 317 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 ZNF773Q6PK81 442 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 OR9G4Q8NGQ1 327 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 ANXA10Q9UJ72 324 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 ADAM30Q9UKF2 790 aa13.24□□□□□ -0.29
LITAF-211ENST00000572255 MRPS7Q9Y2R9 242 aaKnown RBP13.24□□□□□ -0.29
LITAF-211ENST00000572255 ACTL6BO94805 426 aa13.23□□□□□ -0.29
LITAF-211ENST00000572255 IGLV2-14P01704 120 aa13.23□□□□□ -0.29
LITAF-211ENST00000572255 CLEC2LP0C7M8 214 aa13.23□□□□□ -0.29
LITAF-211ENST00000572255 C10orf55Q5SWW7 151 aa13.23□□□□□ -0.29
LITAF-211ENST00000572255 IL34Q6ZMJ4 242 aa13.23□□□□□ -0.29
LITAF-211ENST00000572255 MMD2Q8IY49 270 aa13.23□□□□□ -0.29
LITAF-211ENST00000572255 Q8N1Y9 231 aa13.23□□□□□ -0.29
LITAF-211ENST00000572255 SPIN2AQ99865 258 aa13.23□□□□□ -0.29
LITAF-211ENST00000572255 SPIN2BQ9BPZ2 258 aa13.23□□□□□ -0.29
LITAF-211ENST00000572255 C3orf84H3BNL1 204 aa13.22□□□□□ -0.29
LITAF-211ENST00000572255 PRH1P02810 166 aa13.22□□□□□ -0.29
LITAF-211ENST00000572255 RHOGP84095 191 aa13.22□□□□□ -0.29
LITAF-211ENST00000572255 OR5H6Q8NGV6 325 aa13.22□□□□□ -0.29
LITAF-211ENST00000572255 TCTEX1D2Q8WW35 142 aa13.22□□□□□ -0.29
LITAF-211ENST00000572255 SLC25A38Q96DW6 304 aa13.22□□□□□ -0.29
LITAF-211ENST00000572255 HSD17B10Q99714 261 aaKnown RBP13.22□□□□□ -0.29
LITAF-211ENST00000572255 RNF167Q9H6Y7 350 aa13.22□□□□□ -0.29
LITAF-211ENST00000572255 AKIP1Q9NQ31 210 aa13.22□□□□□ -0.29
LITAF-211ENST00000572255 ETV7Q9Y603 341 aa13.22□□□□□ -0.29
LITAF-211ENST00000572255 LOC100506127A0A0U1RQW1 187 aa13.21□□□□□ -0.29
LITAF-211ENST00000572255 FAM223BA6NKX1 122 aa13.21□□□□□ -0.29
LITAF-211ENST00000572255 IGHV4-30-4P0DP06 118 aa13.21□□□□□ -0.29
LITAF-211ENST00000572255 SCAND1P57086 179 aa13.21□□□□□ -0.29
LITAF-211ENST00000572255 ZNF45Q02386 682 aa13.21□□□□□ -0.29
LITAF-211ENST00000572255 EIF4EBP1Q13541 118 aaPredicted RBP13.21□□□□□ -0.29
LITAF-211ENST00000572255 EXOSC2Q13868 293 aaKnown RBP13.21□□□□□ -0.29
LITAF-211ENST00000572255 TATDN3Q17R31 274 aa13.21□□□□□ -0.29
LITAF-211ENST00000572255 RPEL1Q2QD12 228 aa13.21□□□□□ -0.29
LITAF-211ENST00000572255 FAM223AQ8IWN6 122 aa13.21□□□□□ -0.29
LITAF-211ENST00000572255 VKORC1L1Q8N0U8 176 aa13.21□□□□□ -0.29
LITAF-211ENST00000572255 OR4S2Q8NH73 311 aa13.21□□□□□ -0.29
LITAF-211ENST00000572255 SNAPC3Q92966 411 aa13.21□□□□□ -0.29
LITAF-211ENST00000572255 ZMAT4Q9H898 229 aa13.21□□□□□ -0.29
LITAF-211ENST00000572255 SPATA2Q9UM82 520 aa13.21□□□□□ -0.29
LITAF-211ENST00000572255 TRAV18A0A075B6X5 111 aa13.2□□□□□ -0.3
LITAF-211ENST00000572255 TRBV9A0A0B4J1U6 114 aa13.2□□□□□ -0.3
LITAF-211ENST00000572255 H0Y980 276 aa13.2□□□□□ -0.3
LITAF-211ENST00000572255 OR2A4O95047 310 aa13.2□□□□□ -0.3
LITAF-211ENST00000572255 CSN3P07498 182 aa13.2□□□□□ -0.3
LITAF-211ENST00000572255 ATP5G2Q06055 141 aa13.2□□□□□ -0.3
LITAF-211ENST00000572255 IDNKQ5T6J7 187 aa13.2□□□□□ -0.3
LITAF-211ENST00000572255 SGPP2Q8IWX5 399 aa13.2□□□□□ -0.3
LITAF-211ENST00000572255 TTC9CQ8N5M4 171 aa13.2□□□□□ -0.3
LITAF-211ENST00000572255 BEST4Q8NFU0 473 aa13.2□□□□□ -0.3
LITAF-211ENST00000572255 TAS2R8Q9NYW2 309 aa13.2□□□□□ -0.3
LITAF-211ENST00000572255 BMPR1BO00238 502 aa13.19□□□□□ -0.3
LITAF-211ENST00000572255 BRWD1-AS2P59051 145 aa13.19□□□□□ -0.3
LITAF-211ENST00000572255 ARPC4P59998 168 aa13.19□□□□□ -0.3
LITAF-211ENST00000572255 NEDD8Q15843 81 aa13.19□□□□□ -0.3
LITAF-211ENST00000572255 ZNF66Q6ZN08 573 aa13.19□□□□□ -0.3
LITAF-211ENST00000572255 MFSD4AQ8N468 514 aa13.19□□□□□ -0.3
LITAF-211ENST00000572255 GVQW1Q8N7I0 195 aa13.19□□□□□ -0.3
LITAF-211ENST00000572255 VSTM2AQ8TAG5 236 aa13.19□□□□□ -0.3
LITAF-211ENST00000572255 MUC7Q8TAX7 377 aa13.19□□□□□ -0.3
LITAF-211ENST00000572255 OR2A7Q96R45 310 aa13.19□□□□□ -0.3
LITAF-211ENST00000572255 GPHA2Q96T91 129 aa13.19□□□□□ -0.3
LITAF-211ENST00000572255 C19orf73Q9NVV2 129 aa13.19□□□□□ -0.3
LITAF-211ENST00000572255 SIGLEC8Q9NYZ4 499 aa13.19□□□□□ -0.3
LITAF-211ENST00000572255 DNAH7Q8WXX0 4024 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 A0A0A6YYH2 397 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 HMX3A6NHT5 357 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 A6NJ64 397 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 A8MZ25 164 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 TEX22C9J3V5 150 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 KBTBD11O94819 623 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 PTHLHP12272 177 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 FCGR2CP31995 323 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 RPL27AP46776 148 aaKnown RBP13.18□□□□□ -0.3
LITAF-211ENST00000572255 SLC25A42Q86VD7 318 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 HOGA1Q86XE5 327 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 PUSL1Q8N0Z8 303 aaKnown RBP13.18□□□□□ -0.3
LITAF-211ENST00000572255 NECAP1Q8NC96 275 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 TMEM167AQ8TBQ9 72 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 SECTM1Q8WVN6 248 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 TM2D3Q9BRN9 247 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 ZNF257Q9Y2Q1 563 aa13.18□□□□□ -0.3
LITAF-211ENST00000572255 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.17□□□□□ -0.3
LITAF-211ENST00000572255 OR2J3O76001 311 aa13.17□□□□□ -0.3
LITAF-211ENST00000572255 IL6RP08887 468 aaPredicted RBP13.17□□□□□ -0.3
LITAF-211ENST00000572255 LCN12Q6JVE5 192 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms