RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CTSDP07339 412 aaPredicted RBP2.52□□□□□ -2.01
HERC1-211ENST00000560983 OR9G9P0C7N8 305 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 SPART-AS1P0CW21 52 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 DNAH10OSP0CZ25 163 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 SAA2P0DJI9 122 aaPredicted RBP2.52□□□□□ -2.01
HERC1-211ENST00000560983 C4BPBP20851 252 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 GALP22466 123 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 KCNJ3P48549 501 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 HNRNPA3P51991 378 aaKnown RBP2.52□□□□□ -2.01
HERC1-211ENST00000560983 CMC4P56277 68 aaPredicted RBP2.52□□□□□ -2.01
HERC1-211ENST00000560983 LINC00315P59091 139 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 RPL24P83731 157 aaKnown RBP2.52□□□□□ -2.01
HERC1-211ENST00000560983 TSPAN31Q12999 210 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 RIPK1Q13546 671 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 GNMTQ14749 295 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 IFI44LQ53G44 452 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 METTL21CQ5VZV1 264 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 ELP2Q6IA86 826 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 LAMTOR1Q6IAA8 161 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 CLEC19AQ6UXS0 136 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 SSX7Q7RTT5 188 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 ZNF679Q8IYX0 411 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 SUMF2Q8NBJ7 301 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 NECAP1Q8NC96 275 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 RFT1Q96AA3 541 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 ST6GAL2Q96JF0 529 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 C7orf34Q96L11 122 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 NR1H4Q96RI1 486 aaPredicted RBP2.52□□□□□ -2.01
HERC1-211ENST00000560983 MROQ9BYG7 248 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 FNDC4Q9H6D8 234 aaPredicted RBP2.52□□□□□ -2.01
HERC1-211ENST00000560983 CLEC5AQ9NY25 188 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 GNG12Q9UBI6 72 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 LGALS13Q9UHV8 139 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 OR52A1Q9UKL2 312 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 EXOSC1Q9Y3B2 195 aaKnown RBP2.52□□□□□ -2.01
HERC1-211ENST00000560983 ETV7Q9Y603 341 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 IGHV3-35A0A0C4DH35 117 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 TMEM30CPA0ZSE6 113 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 OR5H14A6NHG9 310 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 SRRM4A7MD48 611 aaKnown RBP2.51□□□□□ -2.01
HERC1-211ENST00000560983 FXYD1O00168 92 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 DYNC1I1O14576 645 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 SNX3O60493 162 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 ZNF254O75437 659 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 GMNNO75496 209 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 RBBP9O75884 186 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 SERPINA3P01011 423 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 HBZP02008 142 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 REG1AP05451 166 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 CLEC3BP05452 202 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 HTN3P15516 51 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 ATF1P18846 271 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 PSMB6P28072 239 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 MC5RP33032 325 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 MAS1LP35410 378 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 ARL3P36405 182 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 MAGEA2P43356 314 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 CCL18P55774 89 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 STX1BP61266 288 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 GK3PQ14409 553 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 OXA1LQ15070 435 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 RPL39P5Q59GN2 51 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 TTC32Q5I0X7 151 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 SLC25A30Q5SVS4 291 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 LEMD1Q68G75 181 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 ERICH5Q6P6B1 374 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 PLEKHG7Q6ZR37 379 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 Q6ZSA8 131 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 TRPT1Q86TN4 253 aaKnown RBP2.51□□□□□ -2.01
HERC1-211ENST00000560983 SERPINA12Q8IW75 414 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 SAXO1Q8IYX7 474 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 TTC9CQ8N5M4 171 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 BBS1Q8NFJ9 593 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 OR5D18Q8NGL1 313 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 GNPDA2Q8TDQ7 276 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 UBLCP1Q8WVY7 318 aaPredicted RBP2.51□□□□□ -2.01
HERC1-211ENST00000560983 MRPS24Q96EL2 167 aaKnown RBP2.51□□□□□ -2.01
HERC1-211ENST00000560983 ADAT3Q96EY9 351 aaPredicted RBP2.51□□□□□ -2.01
HERC1-211ENST00000560983 RNF2Q99496 336 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 APOL4Q9BPW4 351 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 EBF4Q9BQW3 602 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 SULT4A1Q9BR01 284 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 NIPSNAP3BQ9BS92 247 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 TSSK6Q9BXA6 273 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 ZNF436Q9C0F3 470 aaPredicted RBP2.51□□□□□ -2.01
HERC1-211ENST00000560983 OR51V1Q9H2C8 321 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 IFI27L2Q9H2X8 130 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 OR2S2Q9NQN1 319 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 TMEM14BQ9NUH8 114 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 ZNF586Q9NXT0 402 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 LAMP5Q9UJQ1 280 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 ING4Q9UNL4 249 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 WASHC3Q9Y3C0 194 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 UFC1Q9Y3C8 167 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 SNX5Q9Y5X3 404 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 R4GMQ9 66 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 S4R3C0 116 aa2.51□□□□□ -2.01
HERC1-211ENST00000560983 A0A087X002 238 aa2.5□□□□□ -2.01
HERC1-211ENST00000560983 SMIM1B2RUZ4 78 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms