RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 Q96MF0 132 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 RNF5Q99942 180 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.97□□□□□ -1.29
TRAF3-209ENST00000560463 HIF1ANQ9NWT6 349 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 AUP1Q9Y679 476 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 POMT1Q9Y6A1 747 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 ZNF469Q96JG9 3925 aaPredicted RBP6.97□□□□□ -1.29
TRAF3-209ENST00000560463 MYO9AB2RTY4 2548 aa6.96□□□□□ -1.29
TRAF3-209ENST00000560463 CELSR1Q9NYQ6 3014 aa6.96□□□□□ -1.29
TRAF3-209ENST00000560463 A0A0G2JRQ6 117 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 CENPVL3A0A0U1RRI6 287 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 A0A1W2PPI3 338 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 E5RGE8 158 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 SHOXO15266 292 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 MED6O75586 246 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 DEDDO75618 318 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 LY86O95711 162 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 FGF2P09038 288 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 PVALBP20472 110 aaPredicted RBP6.96□□□□□ -1.3
TRAF3-209ENST00000560463 C4BPBP20851 252 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 CD1BP29016 333 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 NUP62P37198 522 aaPredicted RBP6.96□□□□□ -1.3
TRAF3-209ENST00000560463 REG1BP48304 166 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 DLX1P56177 255 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 BPIFB3P59826 476 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 DIAPH2-AS1Q14236 149 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 LRRC37A5PQ49AS3 106 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 AARDQ4LEZ3 155 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 Q5BKY6 102 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 Q6ZRM9 215 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 MOB3BQ86TA1 216 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 ZNF546Q86UE3 836 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 INO80EQ8NBZ0 244 aaPredicted RBP6.96□□□□□ -1.3
TRAF3-209ENST00000560463 OR11H4Q8NGC9 324 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 VSTM2AQ8TAG5 236 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 RHOVQ96L33 236 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 MS4A7Q9GZW8 240 aaPredicted RBP6.96□□□□□ -1.3
TRAF3-209ENST00000560463 BET1LQ9NYM9 111 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 CACNG5Q9UF02 275 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 NSG2Q9Y328 171 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 CSMD1Q96PZ7 3565 aa6.96□□□□□ -1.3
TRAF3-209ENST00000560463 FXYD6-FXYD2A0A087WZ82 144 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 A0A0D9SG52 128 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 K7EPK0 472 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 WRBO00258 174 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 NPFFO15130 113 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 SCGB1D2O95969 90 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 MBPP02686 304 aaPredicted RBP6.95□□□□□ -1.3
TRAF3-209ENST00000560463 IGKV1-16P04430 117 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 IL6RP08887 468 aaPredicted RBP6.95□□□□□ -1.3
TRAF3-209ENST00000560463 IGHV4-31P0DP07 118 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 BRS3P32247 399 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 S100A10P60903 97 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 RPS16P62249 146 aaKnown RBP6.95□□□□□ -1.3
TRAF3-209ENST00000560463 ZNF345Q14585 488 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 TMEM249Q2WGJ8 235 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 GPR157Q5UAW9 335 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 OR4A47Q6IF82 309 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 ACOT7LQ6ZUV0 252 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 ZNF429Q86V71 674 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 FOXRED2Q8IWF2 684 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 PUSL1Q8N0Z8 303 aaKnown RBP6.95□□□□□ -1.3
TRAF3-209ENST00000560463 FAM71E2Q8N5Q1 922 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 OR52E5Q8NH55 327 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 OR4A16Q8NH70 328 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 OR4A5Q8NH83 315 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 DCUN1D4Q92564 292 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 HARBI1Q96MB7 349 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 TSNAXQ99598 290 aaKnown RBP6.95□□□□□ -1.3
TRAF3-209ENST00000560463 RNF126Q9BV68 326 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 C7orf69Q9H7B7 122 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 TMEM140Q9NV12 185 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 FKBP11Q9NYL4 201 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 MBD2Q9UBB5 411 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 HSPB7Q9UBY9 170 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 TNFSF18Q9UNG2 199 aa6.95□□□□□ -1.3
TRAF3-209ENST00000560463 LSM5Q9Y4Y9 91 aaKnown RBP6.95□□□□□ -1.3
TRAF3-209ENST00000560463 ZFHX3Q15911 3703 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 AKAP9Q99996 3911 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 SVEP1Q4LDE5 3571 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 IGHV1-69DA0A0B4J2H0 117 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 C15orf61A6NNL5 157 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 H0YIZ8 118 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 L7N2F9 121 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 ARPC5O15511 151 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 SYNGR2O43760 224 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 RBMXL2O75526 392 aaKnown RBP6.94□□□□□ -1.3
TRAF3-209ENST00000560463 KBTBD11O94819 623 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 OR2F2O95006 317 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 TGFAP01135 160 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 IGHV1-69P01742 117 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 OR9G9P0C7N8 305 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 SAA4P35542 130 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 P2RY1P47900 373 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 NKX2-5P52952 324 aaPredicted RBP6.94□□□□□ -1.3
TRAF3-209ENST00000560463 TAS2R30P59541 319 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 UBE2KP61086 200 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 RELBQ01201 579 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 PRB3Q04118 309 aaPredicted RBP6.94□□□□□ -1.3
TRAF3-209ENST00000560463 TNFRSF9Q07011 255 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms