RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 PARLQ9H300 379 aa3.63□□□□□ -1.83
HMGB3P26-201ENST00000560051 SMDT1Q9H4I9 107 aa3.63□□□□□ -1.83
HMGB3P26-201ENST00000560051 PNRC2Q9NPJ4 139 aaKnown RBP3.63□□□□□ -1.83
HMGB3P26-201ENST00000560051 ASF1BQ9NVP2 202 aa3.63□□□□□ -1.83
HMGB3P26-201ENST00000560051 TVP23BQ9NYZ1 205 aa3.63□□□□□ -1.83
HMGB3P26-201ENST00000560051 ZNF257Q9Y2Q1 563 aa3.63□□□□□ -1.83
HMGB3P26-201ENST00000560051 HEBP2Q9Y5Z4 205 aa3.63□□□□□ -1.83
HMGB3P26-201ENST00000560051 ATG2AQ2TAZ0 1938 aa3.63□□□□□ -1.83
HMGB3P26-201ENST00000560051 CDC42BPAQ5VT25 1732 aa3.63□□□□□ -1.83
HMGB3P26-201ENST00000560051 URB2Q14146 1524 aaKnown RBP3.63□□□□□ -1.83
HMGB3P26-201ENST00000560051 GLI3P10071 1580 aa3.63□□□□□ -1.83
HMGB3P26-201ENST00000560051 ZSWIM8A7E2V4 1837 aa3.63□□□□□ -1.83
HMGB3P26-201ENST00000560051 LRRIQ1Q96JM4 1722 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 CKAP5Q14008 2032 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 A0A087WWC5 75 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 A0A087X0T9 212 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 LOC102724200A0A096LPH7 203 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 TRAV4A0A0B4J268 109 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 SPAARA0A1B0GVQ0 90 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 TRDV1A0A1B0GX56 115 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 SULT2B1O00204 365 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 FCN1O00602 326 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 DEDDO75618 318 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 APOMO95445 188 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 GYPAP02724 150 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 FGF3P11487 239 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 OPRK1P41145 380 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 PSMB2P49721 201 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 SLC25A1P53007 311 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 LIM2P55344 173 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 CATR1Q13166 79 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 SRSF9Q13242 221 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 DUSP5Q16690 384 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 GSG1Q2KHT4 349 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 RRN3P1Q2M238 152 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 LGALSLQ3ZCW2 172 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 FHL5Q5TD97 284 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 ZNF324BQ6AW86 544 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 HEPN1Q6WQI6 88 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 Q6ZVQ6 151 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 ZDHHC22Q8N966 263 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 DCAF4L2Q8NA75 395 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 LY6G5BQ8NDX9 201 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 OR52P1PQ8NH57 321 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 C11orf45Q8TAV5 145 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 SLC25A40Q8TBP6 338 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 DNAJA3Q96EY1 480 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 NMNAT3Q96T66 252 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 SPIN2AQ99865 258 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 SPIN2BQ9BPZ2 258 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 TSSK6Q9BXA6 273 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 GNB1LQ9BYB4 327 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 SLIRPQ9GZT3 109 aaKnown RBP3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 NAA60Q9H7X0 242 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 GNB4Q9HAV0 340 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 KLK11Q9UBX7 282 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 CACNG5Q9UF02 275 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 OR5V1Q9UGF6 321 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 ZNF443Q9Y2A4 671 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 TPRKBQ9Y3C4 175 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 KDM5CP41229 1560 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 NRKQ7Z2Y5 1582 aa3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 BAZ2AQ9UIF9 1905 aaKnown RBP3.62□□□□□ -1.83
HMGB3P26-201ENST00000560051 TNS2Q63HR2 1409 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 ANKARQ7Z5J8 1434 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 FANCMQ8IYD8 2048 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 NKTRP30414 1462 aaKnown RBP3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 A0A087WWV3 80 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 A0A087WZ39 114 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 A0A0G2JK05 382 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 TCRBV5S1A1TA0A578 114 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 C7orf66A4D0T2 115 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 H7C1H1 209 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 J3QQQ9 107 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 J3QT63 122 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 UQCRQO14949 82 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 PDCD6O75340 191 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 EIF4EP06730 217 aaKnown RBP3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 NHLRC4P0CG21 123 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 CD1DP15813 335 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 CTLA4P16410 223 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 HERV-K104P61576 105 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 SEC11AP67812 179 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 SLC38A11Q08AI6 406 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 ADIRFQ15847 76 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 RTL8BQ17RB0 113 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 VMA21Q3ZAQ7 101 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 ATP1A1-AS1Q5TC04 95 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 Q6AWC8 147 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 TMEM14EPQ6UXP3 125 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 Q6ZVH6 145 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 ZNF429Q86V71 674 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 PRR15Q8IV56 129 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 MSRB3Q8IXL7 192 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 FBXL14Q8N1E6 418 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 LINC00301Q8NCQ3 95 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 OR5D16Q8NGK9 328 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 OR51H1Q8NH63 302 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 FNDC9Q8TBE3 224 aa3.61□□□□□ -1.83
HMGB3P26-201ENST00000560051 APOBEC4Q8WW27 367 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms