RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 OR1L4Q8NGR5 311 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 C18orf15Q96N68 181 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 CDX2Q99626 313 aaPredicted RBP7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 TMEM250H0YL14 139 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 IGHV4-39P01824 125 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 GABRG2P18507 467 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 IBA57Q5T440 356 aaKnown RBP7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 IL36BQ9NZH7 164 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 ZNF646O15015 1829 aaPredicted RBP7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 SLIT2O94813 1529 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 DOCK8Q8NF50 2099 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 ATP5G3P48201 142 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 TSKUQ8WUA8 353 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 ZNF840PA6NDX5 716 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 C3orf36Q3SXR2 165 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 LIAT1Q6ZQX7 453 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 TBC1D26Q86UD7 250 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 TRAV2A0A0B4J234 112 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 F8W1H4 67 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 K7ESM1 405 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 TM4SF4P48230 202 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 DCAF4L2Q8NA75 395 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 AP5S1Q9NUS5 200 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 RABAC1Q9UI14 185 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 SCN4AP35499 1836 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 FOXI3A8MTJ6 420 aaPredicted RBP7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 PFN1P07737 140 aaKnown RBP7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 METRNLQ641Q3 311 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 NEUROG3Q9Y4Z2 214 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 MON2Q7Z3U7 1717 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 CENPVL1A0A0U1RR11 272 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 LINC00694P0DN24 101 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 GGTLC2Q14390 218 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 ZXDCQ2QGD7 858 aaPredicted RBP7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 RBPMS2Q6ZRY4 209 aaKnown RBP7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 KIAA0100Q14667 2235 aaKnown RBP7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 CTXND1A0A1B0GTU2 59 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 C2orf27AQ580R0 203 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 FAM90A2PQ658T7 463 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 E9PQ18 207 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 IL2RAP01589 272 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 PRNPP04156 253 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 EDN2P20800 178 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 CD27P26842 260 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 HAPLN4Q86UW8 402 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 FLYWCH2Q96CP2 140 aaKnown RBP7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 CENPVL3A0A0U1RRI6 287 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 DEFA4P12838 97 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 HOXD9P28356 352 aaPredicted RBP7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 RASL10BQ96S79 203 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 TMEM126AQ9H061 195 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 DSPPQ9NZW4 1301 aa7.68□□□□□ -1.18
GTF2A1-203ENST00000553612 IGFBP4P22692 258 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 PRSS41Q7RTY9 318 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 RCHY1Q96PM5 261 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 C1QTNF5Q9BXJ0 243 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 A0A1W2PRX2 142 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 GPR75O95800 540 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 CLDN17P56750 224 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 RSPO4Q2I0M5 234 aaPredicted RBP7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 ARHGEF39Q8N4T4 335 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 CHCHD5Q9BSY4 110 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 DEFB108AA8MXU0 73 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 TMEM50AO95807 157 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 CD3EP07766 207 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 MYF5P13349 255 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 EDDM3AQ14507 147 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 SLC23A3Q6PIS1 610 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 ANKRD33Q7Z3H0 272 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 YPEL5P62699 121 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 RHOGP84095 191 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 FBXL14Q8N1E6 418 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 OR4X2Q8NGF9 303 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 WFDC5Q8TCV5 224 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 DUSP23Q9BVJ7 150 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 NXT2Q9NPJ8 142 aaKnown RBP7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 A0A1W2PRE2 83 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 STPG1Q5TH74 334 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 NEU4Q8WWR8 484 aaPredicted RBP7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 SPTSSAQ969W0 71 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 RNASE7Q9H1E1 156 aaKnown RBP7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 POLDIP2Q9Y2S7 368 aa7.67□□□□□ -1.18
GTF2A1-203ENST00000553612 FXYD7P58549 80 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 ZNF117Q03924 483 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 ZNF721Q8TF20 911 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 CNRIP1Q96F85 164 aaPredicted RBP7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 PGLYRP4Q96LB8 373 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 C4orf45Q96LM5 186 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 TIAM2Q8IVF5 1701 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 CRYBG1Q9Y4K1 1723 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 CACNA1SQ13698 1873 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 SCO2A0A1W2PP80 73 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 TRACP01848 142 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 REG1AP05451 166 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 SP1P08047 785 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 CD300LDQ6UXZ3 194 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 TTC9CQ8N5M4 171 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 OR1L1Q8NH94 360 aa7.66□□□□□ -1.18
GTF2A1-203ENST00000553612 VSTM2LQ96N03 204 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms