RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 SSTR5P35346 364 aa14.62□□□□□ -0.07
SYNE3-202ENST00000553340 TIMP3P35625 211 aa14.62□□□□□ -0.07
SYNE3-202ENST00000553340 ZNF826PQ6ZT77 177 aa14.62□□□□□ -0.07
SYNE3-202ENST00000553340 CXorf67Q86X51 503 aaPredicted RBP14.62□□□□□ -0.07
SYNE3-202ENST00000553340 FAM186AA6NE01 2351 aa14.61□□□□□ -0.07
SYNE3-202ENST00000553340 WISP2O76076 250 aa14.61□□□□□ -0.07
SYNE3-202ENST00000553340 TREML4Q6UXN2 200 aa14.61□□□□□ -0.07
SYNE3-202ENST00000553340 TDGF1P3P51864 188 aa14.61□□□□□ -0.07
SYNE3-202ENST00000553340 TMEM106BQ9NUM4 274 aa14.61□□□□□ -0.07
SYNE3-202ENST00000553340 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.6□□□□□ -0.07
SYNE3-202ENST00000553340 GRIFINA4D1Z8 144 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 DEFB108AA8MXU0 73 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 TPPP2P59282 170 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 SELENOTP62341 195 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 PAFAH1B2P68402 229 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 TRIP6Q15654 476 aaKnown RBP14.6□□□□□ -0.07
SYNE3-202ENST00000553340 PEAR1Q5VY43 1037 aaPredicted RBP14.6□□□□□ -0.07
SYNE3-202ENST00000553340 Q6ZR03 302 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 OCC1Q8TAD7 63 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 FRYLO94915 3013 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 SCO2A0A1W2PP80 73 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 ZNF891A8MT65 544 aaPredicted RBP14.6□□□□□ -0.07
SYNE3-202ENST00000553340 MEOX1P50221 254 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 ZNF90Q03938 601 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 FOXF2Q12947 444 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 AARDQ4LEZ3 155 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 ACP7Q6ZNF0 438 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 OR13A1Q8NGR1 328 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 RFESDQ8TAC1 157 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 PRR7Q8TB68 274 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 IER2Q9BTL4 223 aa14.6□□□□□ -0.07
SYNE3-202ENST00000553340 HEYLQ9NQ87 328 aaPredicted RBP14.6□□□□□ -0.07
SYNE3-202ENST00000553340 TRAV9-1A0A075B6T8 112 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 G0S2P27469 103 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 RPL29P47914 159 aaKnown RBP14.59□□□□□ -0.07
SYNE3-202ENST00000553340 PRAMEF5Q5TYX0 476 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 PRAMEF6Q5VXH4 476 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 C11orf53Q8IXP5 236 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 TPRX1Q8N7U7 411 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 OR4A16Q8NH70 328 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 GMPPAQ96IJ6 420 aaPredicted RBP14.59□□□□□ -0.07
SYNE3-202ENST00000553340 TMEM204Q9BSN7 226 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 FAM90A9PA6NNJ1 464 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 HPRT1P00492 218 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 HNF1AP20823 631 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 DCAF10Q5QP82 559 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 MIC13Q5XKP0 118 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 MGST2Q99735 147 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 GGTLC1Q9BX51 225 aa14.59□□□□□ -0.07
SYNE3-202ENST00000553340 M0QZK8 103 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 RRHO14718 337 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 SPINT2O43291 252 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 FCGR3BO75015 233 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 TFF1P04155 84 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 ACP1P24666 158 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 HOXA4Q00056 320 aaPredicted RBP14.58□□□□□ -0.08
SYNE3-202ENST00000553340 TGFBR3Q03167 851 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 TOMM20LQ6UXN7 152 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 ZNF705AQ6ZN79 300 aaPredicted RBP14.58□□□□□ -0.08
SYNE3-202ENST00000553340 KLF14Q8TD94 323 aaPredicted RBP14.58□□□□□ -0.08
SYNE3-202ENST00000553340 MS4A5Q9H3V2 200 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 KLF13Q9Y2Y9 288 aaPredicted RBP14.58□□□□□ -0.08
SYNE3-202ENST00000553340 KLRC4-KLRK1H3BQV0 150 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 TNFSF15O95150 251 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 SP1P08047 785 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 ADH4P08319 380 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 CBLN1P23435 193 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 DUTP33316 252 aaKnown RBP14.58□□□□□ -0.08
SYNE3-202ENST00000553340 MPV17P39210 176 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 GPR12P47775 334 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 CASP6P55212 293 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 TMPRSS3P57727 454 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 TMEM105Q8N8V8 129 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 IL36BQ9NZH7 164 aa14.58□□□□□ -0.08
SYNE3-202ENST00000553340 CRISP2P16562 243 aa14.57□□□□□ -0.08
SYNE3-202ENST00000553340 THBS3P49746 956 aa14.57□□□□□ -0.08
SYNE3-202ENST00000553340 RANP62826 216 aaKnown RBP14.57□□□□□ -0.08
SYNE3-202ENST00000553340 HTD2P86397 168 aa14.57□□□□□ -0.08
SYNE3-202ENST00000553340 Q6ZWC4 215 aa14.57□□□□□ -0.08
SYNE3-202ENST00000553340 MRPL52Q86TS9 123 aaKnown RBP14.57□□□□□ -0.08
SYNE3-202ENST00000553340 OR52E5Q8NH55 327 aa14.57□□□□□ -0.08
SYNE3-202ENST00000553340 TMEM68Q96MH6 324 aa14.57□□□□□ -0.08
SYNE3-202ENST00000553340 SPRY4Q9C004 299 aa14.57□□□□□ -0.08
SYNE3-202ENST00000553340 MRPL18Q9H0U6 180 aaKnown RBP14.57□□□□□ -0.08
SYNE3-202ENST00000553340 DEFB127Q9H1M4 99 aa14.57□□□□□ -0.08
SYNE3-202ENST00000553340 CXXC4Q9H2H0 198 aa14.57□□□□□ -0.08
SYNE3-202ENST00000553340 TP53TG3Q9ULZ0 132 aa14.57□□□□□ -0.08
SYNE3-202ENST00000553340 VPS13AQ96RL7 3174 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 YPEL1O60688 119 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 ESDP10768 282 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 VDAC2P45880 294 aaPredicted RBP14.56□□□□□ -0.08
SYNE3-202ENST00000553340 ZNF718Q3SXZ3 478 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 YPEL2Q96QA6 119 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 PARD6AQ9NPB6 346 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 METRNQ9UJH8 293 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 YTHDF2Q9Y5A9 579 aaKnown RBP14.56□□□□□ -0.08
SYNE3-202ENST00000553340 A8MXE2 369 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 PRSS46E5RG02 174 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 AQP7O14520 342 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 ZNF25P17030 456 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms