RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ZNF645Q8N7E2 425 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 OR4D10Q8NGI6 311 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 OR4C16Q8NGL9 310 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 OR8U1Q8NH10 309 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 OR56B4Q8NH76 319 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 ZFAND1Q8TCF1 268 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 LEAP2Q969E1 77 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 TOMM40LQ969M1 308 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 RPEQ96AT9 228 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 ADTRPQ96IZ2 230 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 AKR1E2Q96JD6 320 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 SCGB3A2Q96PL1 93 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 HSD17B10Q99714 261 aaKnown RBP4.61□□□□□ -1.67
SCAF11-213ENST00000550629 SLC6A7Q99884 636 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 SLC25A21Q9BQT8 299 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF2Q9BSG1 426 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-213ENST00000550629 PARP12Q9H0J9 701 aaKnown RBP4.61□□□□□ -1.67
SCAF11-213ENST00000550629 HRASLSQ9HDD0 168 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 COPZ2Q9P299 210 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 DSCAML1Q8TD84 2053 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 HIVEP2P31629 2446 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 MTORP42345 2549 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 NF1P21359 2839 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 NIPBLQ6KC79 2804 aaeCLIP4.6□□□□□ -1.67
SCAF11-213ENST00000550629 YLPM1P49750 1951 aaKnown RBP4.6□□□□□ -1.67
SCAF11-213ENST00000550629 F8P00451 2351 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 SAA2-SAA4A0A096LPE2 208 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 IGKV1D-13A0A0B4J2D9 117 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 A0A0U1RQK1 487 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 RNF212BA8MTL3 300 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 J3QRK9 145 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 HSD17B6O14756 317 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 SLC31A2O15432 143 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 LYRM1O43325 122 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 B3GALNT1O75752 331 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 NDUFB8O95169 186 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 IGHV3-7P01780 117 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 FAM157CP0CG43 387 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 SAA2P0DJI9 122 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-213ENST00000550629 IGKV1-13P0DP09 117 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 SRD5A1P18405 259 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 BRS3P32247 399 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 MC5RP33032 325 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 DLX1P56177 255 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 DCTN2Q13561 401 aaKnown RBP4.6□□□□□ -1.67
SCAF11-213ENST00000550629 FAM53AQ6NSI3 398 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-213ENST00000550629 C16orf87Q6PH81 154 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 RBMS3Q6XE24 437 aaKnown RBP4.6□□□□□ -1.67
SCAF11-213ENST00000550629 BRD3OSQ6XYD6 125 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 IDO2Q6ZQW0 420 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 C5orf24Q7Z6I8 188 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 TGIF2LXQ8IUE1 241 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 ODF3L1Q8IXM7 274 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 PDZD9Q8IXQ8 264 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 LYG1Q8N1E2 194 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 TMEM86BQ8N661 226 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 TCTEX1D1Q8N7M0 179 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 OR51S1Q8NGJ8 323 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 CD300LFQ8TDQ1 290 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 RTN4IP1Q8WWV3 396 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF251Q9BRH9 671 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 SLC5A7Q9GZV3 580 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 OR2D2Q9H210 308 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 ABCB10Q9NRK6 738 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 FAM212BQ9NTI7 297 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-213ENST00000550629 MCUBQ9NWR8 336 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 RBM7Q9Y580 266 aaKnown RBP4.6□□□□□ -1.67
SCAF11-213ENST00000550629 POMT1Q9Y6A1 747 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 ABCA1O95477 2261 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 CSPG4Q6UVK1 2322 aa4.6□□□□□ -1.67
SCAF11-213ENST00000550629 PIGBOS1A0A0B4J2F0 54 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 IGHV1-3A0A0C4DH29 117 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 A0A1W2PPE3 182 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 A0A1W2PPI3 338 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 OR5H14A6NHG9 310 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 INAFM1C9JVW0 142 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 CLDN34H7C241 214 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 GPR31O00270 319 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 PLA2G10O15496 165 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 RBFOX2O43251 390 aaKnown RBP eCLIP4.59□□□□□ -1.67
SCAF11-213ENST00000550629 NDUFB6O95139 128 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 CTSDP07339 412 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-213ENST00000550629 FAM106CPP0CH98 169 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 RRASP10301 218 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 CD1BP29016 333 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 SLC6A1P30531 599 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 GNRHRP30968 328 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 KIR2DS2P43631 304 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 THBS3P49746 956 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 RAB13P51153 203 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 FXYD4P59646 89 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 RND3P61587 244 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 PRB3Q04118 309 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-213ENST00000550629 EIF4EBP1Q13541 118 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-213ENST00000550629 SSX2Q16385 188 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 LRRC75BQ2VPJ9 315 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 SCGB2B2Q4G0G5 96 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 ABCA11PQ4W5N1 156 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 DOCK11Q5JSL3 2073 aa4.59□□□□□ -1.67
SCAF11-213ENST00000550629 LDLRAD2Q5SZI1 272 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms