RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 GABARAPH6UMI1 98 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 CTDSPLO15194 276 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 IGHG4P01861 327 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 PF4P02776 101 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 PPIFP30405 207 aaKnown RBP12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 GNRHRP30968 328 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 BRWD1-AS2P59051 145 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 TSPAN5P62079 268 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 SSBP1Q04837 148 aaKnown RBP12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 FOXE3Q13461 319 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 VMA21Q3ZAQ7 101 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 ACTBL2Q562R1 376 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 ZNF818PQ6ZRF7 136 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 TMEM17Q86X19 198 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 RNF152Q8N8N0 203 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 TCTEX1D2Q8WW35 142 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 PARP11Q9NR21 331 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 TAS2R8Q9NYW2 309 aa12.28□□□□□ -0.44
CHMP1A-206ENST00000549139 TRAV41A0A0B4J266 112 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 G3V318 75 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 C3orf84H3BNL1 204 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 CA2P00918 260 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 EGR2P11161 476 aaPredicted RBP12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 TNFSF8P32971 234 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 KIR2DS2P43631 304 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 UBE2KP61086 200 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 RPL23AP62750 156 aaKnown RBP12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 TMEM267Q0VDI3 215 aaPredicted RBP12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 CATR1Q13166 79 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 RNASE12Q5GAN4 147 aaKnown RBP12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 CXorf66Q5JRM2 361 aaPredicted RBP12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 LPCAT3Q6P1A2 487 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 LINC00482Q8N8I6 264 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 OR4S2Q8NH73 311 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 DCUN1D5Q9BTE7 237 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 FBXO7Q9Y3I1 522 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 WSB1Q9Y6I7 421 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 A3GALT2U3KPV4 340 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 U3KQK5 164 aa12.27□□□□□ -0.45
CHMP1A-206ENST00000549139 TNFSF12O43508 249 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 NHLRC4P0CG21 123 aaPredicted RBP12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 TBPP20226 339 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 SLC6A1P30531 599 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 UCP3P55916 312 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 DGCR2P98153 550 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 NDPQ00604 133 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 IL18Q14116 193 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 FXYD3Q14802 87 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 AKIRIN2Q53H80 203 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 C19orf54Q5BKX5 351 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 KHDC1LQ5JSQ8 128 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 TCTEX1D1Q8N7M0 179 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 TMEM229BQ8NBD8 167 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 MINDY2Q8NBR6 621 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 GPHA2Q96T91 129 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 SOSTQ9BQB4 213 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 TPSG1Q9NRR2 321 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 NDUFA13Q9P0J0 144 aa12.26□□□□□ -0.45
CHMP1A-206ENST00000549139 FABP12A6NFH5 140 aa12.25□□□□□ -0.45
CHMP1A-206ENST00000549139 ARPC1BO15143 372 aaKnown RBP12.25□□□□□ -0.45
CHMP1A-206ENST00000549139 RBFOX2O43251 390 aaKnown RBP eCLIP12.25□□□□□ -0.454e-7■□□□□ 8.3
CHMP1A-206ENST00000549139 IGLV1-40P01703 118 aa12.25□□□□□ -0.45
CHMP1A-206ENST00000549139 IFNA6P05013 189 aa12.25□□□□□ -0.45
CHMP1A-206ENST00000549139 PSMB8P28062 276 aa12.25□□□□□ -0.45
CHMP1A-206ENST00000549139 TAS2R19P59542 299 aa12.25□□□□□ -0.45
CHMP1A-206ENST00000549139 PJVKQ0ZLH3 352 aa12.25□□□□□ -0.45
CHMP1A-206ENST00000549139 MRGPRG-AS1Q2M3A8 158 aa12.25□□□□□ -0.45
CHMP1A-206ENST00000549139 RNASE10Q5GAN6 216 aaKnown RBP12.25□□□□□ -0.45
CHMP1A-206ENST00000549139 OR2B11Q5JQS5 317 aa12.25□□□□□ -0.45
CHMP1A-206ENST00000549139 SMIM4Q8WVI0 70 aa12.25□□□□□ -0.45
CHMP1A-206ENST00000549139 FXYD6Q9H0Q3 95 aa12.25□□□□□ -0.45
CHMP1A-206ENST00000549139 M0QYG6 137 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 GPR31O00270 319 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 PGLYRP1O75594 196 aaPredicted RBP12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 CNIH1O95406 144 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 HRASP01112 189 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 CD74P04233 296 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 CD3DP04234 171 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 RPLP1P05386 114 aaKnown RBP12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 CDX1P47902 265 aaPredicted RBP12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 SSBP2P81877 361 aaPredicted RBP12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 DCTN2Q13561 401 aaKnown RBP12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 ECSCRQ19T08 205 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 ETV3LQ6ZN32 361 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 CMTM1Q8IZ96 169 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 SPAG16Q8N0X2 631 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 ARRDC1Q8N5I2 433 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 VSTM2AQ8TAG5 236 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 CD300LFQ8TDQ1 290 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 ABHD5Q8WTS1 349 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 ARPC1AQ92747 370 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 DGCR14Q96DF8 476 aaKnown RBP12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 TMEM68Q96MH6 324 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 AIFM2Q9BRQ8 373 aa12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 FAM103A1Q9BTL3 118 aaKnown RBP12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 TINAGL1Q9GZM7 467 aaPredicted RBP12.24□□□□□ -0.45
CHMP1A-206ENST00000549139 GSTZ1O43708 216 aaPredicted RBP12.23□□□□□ -0.45
CHMP1A-206ENST00000549139 CREBL2O60519 120 aaPredicted RBP12.23□□□□□ -0.45
CHMP1A-206ENST00000549139 HPRT1P00492 218 aa12.23□□□□□ -0.45
CHMP1A-206ENST00000549139 SAA1P0DJI8 122 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms