RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 BRWD1-AS2P59051 145 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 FAM219AQ8IW50 185 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 ODF3L1Q8IXM7 274 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 C8orf46Q8TAG6 207 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 PLEKHA2Q9HB19 425 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 SMG1Q96Q15 3661 aaKnown RBP7.65□□□□□ -1.18
GNE-206ENST00000543356 NBASA2RRP1 2371 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 SAA2-SAA4A0A096LPE2 208 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 IFITM10A6NMD0 228 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 F5H0A9 414 aaPredicted RBP7.65□□□□□ -1.18
GNE-206ENST00000543356 M0R1X1 148 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 OVOL3O00110 214 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 RBFOX2O43251 390 aaKnown RBP eCLIP7.65□□□□□ -1.18
GNE-206ENST00000543356 RBP4P02753 201 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 P0C879 139 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 SAA2P0DJI9 122 aaPredicted RBP7.65□□□□□ -1.18
GNE-206ENST00000543356 RAB4AP20338 218 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 NKX2-1P43699 371 aaPredicted RBP7.65□□□□□ -1.18
GNE-206ENST00000543356 UBA52P62987 128 aaKnown RBP7.65□□□□□ -1.18
GNE-206ENST00000543356 ID3Q02535 119 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 RPL39P5Q59GN2 51 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 SAPCD1Q5SSQ6 148 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 FOXRED2Q8IWF2 684 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 ZNF596Q8TC21 504 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 IGFBPL1Q8WX77 278 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 C11orf1Q9H5F2 150 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 RCL1Q9Y2P8 373 aaKnown RBP7.65□□□□□ -1.18
GNE-206ENST00000543356 MMP24Q9Y5R2 645 aa7.65□□□□□ -1.18
GNE-206ENST00000543356 A0A1W2PPH5 198 aa7.65□□□□□ -1.19
GNE-206ENST00000543356 MSGN1A6NI15 193 aa7.65□□□□□ -1.19
GNE-206ENST00000543356 S1PR2O95136 353 aa7.65□□□□□ -1.19
GNE-206ENST00000543356 IGHV3-7P01780 117 aa7.65□□□□□ -1.19
GNE-206ENST00000543356 HKR1P10072 659 aa7.65□□□□□ -1.19
GNE-206ENST00000543356 MMP9P14780 707 aa7.65□□□□□ -1.19
GNE-206ENST00000543356 P2RY1P47900 373 aa7.65□□□□□ -1.19
GNE-206ENST00000543356 THBS3P49746 956 aa7.65□□□□□ -1.19
GNE-206ENST00000543356 TNFRSF9Q07011 255 aa7.65□□□□□ -1.19
GNE-206ENST00000543356 PEA15Q15121 130 aa7.65□□□□□ -1.19
GNE-206ENST00000543356 LINC00311Q8N616 119 aa7.65□□□□□ -1.19
GNE-206ENST00000543356 DDB2Q92466 427 aa7.65□□□□□ -1.19
GNE-206ENST00000543356 ADTRPQ96IZ2 230 aa7.65□□□□□ -1.19
GNE-206ENST00000543356 KCNAB3O43448 404 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 SOX15O60248 233 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 ZNF816Q0VGE8 651 aaPredicted RBP7.64□□□□□ -1.19
GNE-206ENST00000543356 WDR25Q64LD2 544 aaPredicted RBP7.64□□□□□ -1.19
GNE-206ENST00000543356 NCR3LG1Q68D85 454 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 LYG1Q8N1E2 194 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 PATZ1Q9HBE1 687 aaKnown RBP7.64□□□□□ -1.19
GNE-206ENST00000543356 SIRT7Q9NRC8 400 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 CACNG5Q9UF02 275 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 PKDREJQ9NTG1 2253 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 EREGO14944 169 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 IGHV1-8P0DP01 117 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 EPHA1P21709 976 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 RPL12P30050 165 aaKnown RBP7.64□□□□□ -1.19
GNE-206ENST00000543356 SRSF3P84103 164 aaKnown RBP7.64□□□□□ -1.19
GNE-206ENST00000543356 CXorf66Q5JRM2 361 aaPredicted RBP7.64□□□□□ -1.19
GNE-206ENST00000543356 GPR157Q5UAW9 335 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 FAM71F2Q6NXP2 309 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 CLEC9AQ6UXN8 241 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 SPNS3Q6ZMD2 512 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 ETV3LQ6ZN32 361 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 C1orf229Q6ZS94 237 aaPredicted RBP7.64□□□□□ -1.19
GNE-206ENST00000543356 ZNF833PQ6ZTB9 187 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 LY6G5BQ8NDX9 201 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 HIST1H2BAQ96A08 127 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 S1PR3Q99500 378 aa7.64□□□□□ -1.19
GNE-206ENST00000543356 KIAA1324LA8MWY0 1029 aaPredicted RBP7.63□□□□□ -1.19
GNE-206ENST00000543356 FAM90A26D6RGX4 464 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 TAAR5O14804 337 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 GPR137BO60478 399 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 HPRT1P00492 218 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 HIST1H1BP16401 226 aaKnown RBP7.63□□□□□ -1.19
GNE-206ENST00000543356 GPR6P46095 362 aaPredicted RBP7.63□□□□□ -1.19
GNE-206ENST00000543356 GAMTQ14353 236 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 USF2Q15853 346 aaPredicted RBP7.63□□□□□ -1.19
GNE-206ENST00000543356 LBHQ53QV2 105 aaPredicted RBP7.63□□□□□ -1.19
GNE-206ENST00000543356 C10orf91Q5T1B1 145 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 Q6ZRM9 215 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 C11orf42Q8N5U0 333 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 STOML3Q8TAV4 291 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 BSCL2Q96G97 398 aaPredicted RBP7.63□□□□□ -1.19
GNE-206ENST00000543356 SLC25A32Q9H2D1 315 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 CARHSP1Q9Y2V2 147 aaKnown RBP7.63□□□□□ -1.19
GNE-206ENST00000543356 ROS1P08922 2347 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 FAM90A9PA6NNJ1 464 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 FCGR3BO75015 233 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 NPSP0C0P6 89 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 G6PCP35575 357 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 SRSF1Q07955 248 aaKnown RBP eCLIP7.63□□□□□ -1.19
GNE-206ENST00000543356 MIDNQ504T8 468 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 OR4S2Q8NH73 311 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 TNFRSF14Q92956 283 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 PARD6GQ9BYG4 376 aaPredicted RBP7.63□□□□□ -1.19
GNE-206ENST00000543356 TMEM133Q9H2Q1 129 aa7.63□□□□□ -1.19
GNE-206ENST00000543356 CACNA1BQ00975 2339 aa7.62□□□□□ -1.19
GNE-206ENST00000543356 PPIAL4CA0A0B4J2A2 164 aa7.62□□□□□ -1.19
GNE-206ENST00000543356 J3QR06 171 aa7.62□□□□□ -1.19
GNE-206ENST00000543356 SSSCA1O60232 199 aa7.62□□□□□ -1.19
GNE-206ENST00000543356 IFNA10P01566 189 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms