RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 TAF15Q92804 592 aaKnown RBP eCLIP8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 HSD17B10Q99714 261 aaKnown RBP8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 OR51J1Q9H342 316 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 TNCP24821 2201 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 MPPED1O15442 326 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 PEX14O75381 377 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 IGKV1-39P01597 117 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 IGKV1D-39P04432 117 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 RLN1P04808 185 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 PGAM2P15259 253 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 F2RP25116 425 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 PIGPP57054 158 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 UBA52P62987 128 aaKnown RBP8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 LGALSLQ3ZCW2 172 aaPredicted RBP8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 TMEM177Q53S58 311 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 LPCAT3Q6P1A2 487 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 ZDHHC16Q969W1 377 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 TP53RKQ96S44 253 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 SLC25A21Q9BQT8 299 aaPredicted RBP8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 VPREB3Q9UKI3 123 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 POMT1Q9Y6A1 747 aa8.51□□□□□ -1.05
NPIPB3-210ENST00000542817 PLXNB1O43157 2135 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 TRRAPQ9Y4A5 3859 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 CRYM-AS1A6NIL9 109 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 MOSP00540 346 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 TCRBP04435 133 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 CRYGBP07316 175 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 RNASE1P07998 156 aaKnown RBP8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 BRS3P32247 399 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 MC5RP33032 325 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 ECI1P42126 302 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 RELBQ01201 579 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 SCGB2A2Q13296 93 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 EXOSC2Q13868 293 aaKnown RBP8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 HNF4GQ14541 408 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 RBMS2Q15434 407 aaKnown RBP8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 OR2B11Q5JQS5 317 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 Q6ZS46 218 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 KCTD9Q7L273 389 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 PDPNQ86YL7 162 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 Q8N9W7 124 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 OR51H1Q8NH63 302 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 OR5R1Q8NH85 324 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 ADTRPQ96IZ2 230 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 RBM14Q96PK6 669 aaKnown RBP8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 ZNF436Q9C0F3 470 aaPredicted RBP8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 TNFRSF19Q9NS68 423 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 SLC35D1Q9NTN3 355 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 WASHC3Q9Y3C0 194 aa8.5□□□□□ -1.05
NPIPB3-210ENST00000542817 RBFOX2O43251 390 aaKnown RBP eCLIP8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 FCGR3BO75015 233 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 OR2F2O95006 317 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 NDUFA3O95167 84 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 IL6RP08887 468 aaPredicted RBP8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 FAM106CPP0CH98 169 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 MECP2P51608 486 aaKnown RBP8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 B2MP61769 119 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 BLCAPP62952 87 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 S100A12P80511 92 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 SSBP2P81877 361 aaPredicted RBP8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 SP6Q3SY56 376 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 HSD17B13Q7Z5P4 300 aaPredicted RBP8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 SLC25A42Q86VD7 318 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 CMTM1Q8IZ96 169 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 FAM71E2Q8N5Q1 922 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 NPBQ8NG41 125 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 OR11H7Q8NGC8 314 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 OR2T10Q8NGZ9 312 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 ZNF418Q8TF45 676 aaPredicted RBP8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 GLYATL2Q8WU03 294 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 TCTEX1D2Q8WW35 142 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 TPSG1Q9NRR2 321 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 STAB1Q9NY15 2570 aa8.49□□□□□ -1.05
NPIPB3-210ENST00000542817 CMYA5Q8N3K9 4069 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 MFSD2BA6NFX1 497 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 SH2D7A6NKC9 451 aaPredicted RBP8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 TCF21O43680 179 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 GPR137BO60478 399 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 S1PR2O95136 353 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 P0C879 139 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 TMEM11P17152 192 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 ANXA7P20073 488 aaKnown RBP8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 UCP1P25874 307 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 PPP1R1AQ13522 171 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 TMEM187Q14656 261 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 C11orf88Q6PI97 169 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 VKORC1L1Q8N0U8 176 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 SPAG16Q8N0X2 631 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 C5orf56Q8N8D9 126 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 OR11H4Q8NGC9 324 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 ASB13Q8WXK3 278 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 FLYWCH2Q96CP2 140 aaKnown RBP8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 GALNT14Q96FL9 552 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 SLC25A33Q9BSK2 321 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 C20orf85Q9H1P6 137 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 NAA60Q9H7X0 242 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 ZC4H2Q9NQZ6 224 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 FAM212BQ9NTI7 297 aaPredicted RBP8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 PRR13Q9NZ81 148 aa8.48□□□□□ -1.05
NPIPB3-210ENST00000542817 C3orf85A0A1B0GTC6 90 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 217.8 ms