RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 APOC4-APOC2K7ER74 178 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 PLPP3O14495 311 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 HSD17B6O14756 317 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 TRAF3IP2O43734 574 aaPredicted RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 CNMDO75829 334 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 OR2J3O76001 311 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 MPZL1O95297 269 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 TIMP1P01033 207 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 APOC2P02655 101 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 MAS1P04201 325 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 GAPDHP04406 335 aaKnown RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 HLA-DQB2P05538 268 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 IGKV5-2P06315 115 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 MMP7P09237 267 aaPredicted RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 TRGC1P0CF51 173 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 IGLC1P0CG04 106 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 PGA3P0DJD8 388 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 PIPP12273 146 aaPredicted RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 ZNF17P17021 662 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 NTSP30990 170 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 BTCP35070 178 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 PTGDSP41222 190 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 LHX2P50458 406 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 TCL1AP56279 114 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 RPS25P62851 125 aaKnown RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 MEF2BQ02080 365 aaPredicted RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 BCL2L1Q07817 233 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 SMAGPQ0VAQ4 97 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 TMEM267Q0VDI3 215 aaPredicted RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 C1DQ13901 141 aaKnown RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 VGLL4Q14135 290 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 PDGFRLQ15198 375 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 ACOT6Q3I5F7 207 aaPredicted RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 CCSMST1Q4G0I0 132 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 ATP6AP1LQ52LC2 224 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 CPTPQ5TA50 214 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 GLT8D1Q68CQ7 371 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 UFSP1Q6NVU6 142 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 C19orf35Q6ZS72 473 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 COMMD6Q7Z4G1 85 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 GKN2Q86XP6 184 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 TGIF2LYQ8IUE0 185 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 FBXO16Q8IX29 292 aaPredicted RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 ZADH2Q8N4Q0 377 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 KRTCAP2Q8N6L1 136 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 NOXO1Q8NFA2 376 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 OR10G9Q8NGN4 311 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 OR6K2Q8NGY2 324 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 OR2G3Q8NGZ4 309 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 OR5AK2Q8NH90 309 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 OR2AE1Q8NHA4 323 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 ZNRF2Q8NHG8 242 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 LYPD6BQ8NI32 183 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 PP6455Q8WZ26 134 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 TSLPQ969D9 159 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 PTX4Q96A99 478 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 MS4A6EQ96DS6 147 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 ADTRPQ96IZ2 230 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 ZNF75AQ96N20 296 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 OXGR1Q96P68 337 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 GPER1Q99527 375 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 P2RX4Q99571 388 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 CDX2Q99626 313 aaPredicted RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 GPR22Q99680 433 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 NDFIP1Q9BT67 221 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 VAMP8Q9BV40 100 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 FAIM2Q9BWQ8 316 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 ZNF471Q9BX82 626 aaPredicted RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 PECRQ9BY49 303 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 CHRNA10Q9GZZ6 450 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 LPAR5Q9H1C0 372 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 PARP11Q9NR21 331 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 TAS2R5Q9NYW4 299 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 B4GALT7Q9UBV7 327 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 CYSLTR1Q9Y271 337 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 BTRCQ9Y297 605 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 RPL36Q9Y3U8 105 aaKnown RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 WSB1Q9Y6I7 421 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 PLXND1Q9Y4D7 1925 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 IGHV2-26A0A0B4J1V2 119 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 IGLC7A0M8Q6 106 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 PRSS37A4D1T9 235 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 MEIS3P1A6NDR6 274 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 TMEM235A6NFC5 223 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 FABP5P3A8MUU1 101 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 F5H5P2 479 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 F5H5T6 163 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 SAP18O00422 153 aaKnown RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 CDC42EP2O14613 210 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 HMGB3O15347 200 aaKnown RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 GSTZ1O43708 216 aaPredicted RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 CD5LO43866 347 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 FCN3O75636 299 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 OR7C1O76099 320 aaPredicted RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 LSM8O95777 96 aaKnown RBP2.41□□□□□ -2.02
USP28-210ENST00000542033 CD8AP01732 235 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 IFNW1P05000 195 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 CRYGDP07320 174 aa2.41□□□□□ -2.02
USP28-210ENST00000542033 RHOCP08134 193 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms