RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CCDC32Q9BV29 185 aa14.85□□□□□ -0.03
VPS33A-205ENST00000541169 OR51J1Q9H342 316 aa14.85□□□□□ -0.03
VPS33A-205ENST00000541169 MCUBQ9NWR8 336 aa14.85□□□□□ -0.03
VPS33A-205ENST00000541169 C14orf166Q9Y224 244 aaKnown RBP14.85□□□□□ -0.03
VPS33A-205ENST00000541169 SLC25A17O43808 307 aa14.84□□□□□ -0.03
VPS33A-205ENST00000541169 RLN1P04808 185 aa14.84□□□□□ -0.03
VPS33A-205ENST00000541169 CTSDP07339 412 aaPredicted RBP14.84□□□□□ -0.03
VPS33A-205ENST00000541169 RPA2P15927 270 aa14.84□□□□□ -0.03
VPS33A-205ENST00000541169 NQO2P16083 231 aa14.84□□□□□ -0.03
VPS33A-205ENST00000541169 TMEM267Q0VDI3 215 aaPredicted RBP14.84□□□□□ -0.03
VPS33A-205ENST00000541169 STPG2Q8N412 459 aa14.84□□□□□ -0.03
VPS33A-205ENST00000541169 OR4X2Q8NGF9 303 aa14.84□□□□□ -0.03
VPS33A-205ENST00000541169 OR51S1Q8NGJ8 323 aa14.84□□□□□ -0.03
VPS33A-205ENST00000541169 TMEM68Q96MH6 324 aa14.84□□□□□ -0.03
VPS33A-205ENST00000541169 SLC25A21Q9BQT8 299 aaPredicted RBP14.84□□□□□ -0.03
VPS33A-205ENST00000541169 C7orf50Q9BRJ6 194 aaKnown RBP14.84□□□□□ -0.03
VPS33A-205ENST00000541169 COPZ2Q9P299 210 aa14.84□□□□□ -0.03
VPS33A-205ENST00000541169 IGHV7-81A0A0B4J1V7 117 aa14.83□□□□□ -0.04
VPS33A-205ENST00000541169 PIGBOS1A0A0B4J2F0 54 aa14.83□□□□□ -0.04
VPS33A-205ENST00000541169 MPPED1O15442 326 aa14.83□□□□□ -0.04
VPS33A-205ENST00000541169 CRYGBP07316 175 aa14.83□□□□□ -0.04
VPS33A-205ENST00000541169 VDAC1P21796 283 aa14.83□□□□□ -0.04
VPS33A-205ENST00000541169 CD40LGP29965 261 aa14.83□□□□□ -0.04
VPS33A-205ENST00000541169 CRIP2P52943 208 aaPredicted RBP14.83□□□□□ -0.04
VPS33A-205ENST00000541169 PIGPP57054 158 aa14.83□□□□□ -0.04
VPS33A-205ENST00000541169 ERVK-16P61578 105 aa14.83□□□□□ -0.04
VPS33A-205ENST00000541169 POU2AF1Q16633 256 aa14.83□□□□□ -0.04
VPS33A-205ENST00000541169 ZNF57Q68EA5 555 aaPredicted RBP14.83□□□□□ -0.04
VPS33A-205ENST00000541169 OR13C8Q8NGS7 320 aa14.83□□□□□ -0.04
VPS33A-205ENST00000541169 WIPF2Q8TF74 440 aaPredicted RBP14.83□□□□□ -0.04
VPS33A-205ENST00000541169 RHOVQ96L33 236 aa14.83□□□□□ -0.04
VPS33A-205ENST00000541169 WDR12Q9GZL7 423 aaKnown RBP14.83□□□□□ -0.04
VPS33A-205ENST00000541169 HRASLSQ9HDD0 168 aa14.83□□□□□ -0.04
VPS33A-205ENST00000541169 AKIP1Q9NQ31 210 aa14.83□□□□□ -0.04
VPS33A-205ENST00000541169 PSMB11A5LHX3 300 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 ACTL6BO94805 426 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 ATG12O94817 140 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 OR2A4O95047 310 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 MAS1LP35410 378 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 PPP5CP53041 499 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 BRWD1-AS2P59051 145 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 CX3CL1P78423 397 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 PHLDA2Q53GA4 152 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 OR2B11Q5JQS5 317 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 TBC1D26Q86UD7 250 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 MMD2Q8IY49 270 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 OR5AU1Q8NGC0 362 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 MARCH1Q8TCQ1 289 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 OR2A7Q96R45 310 aa14.82□□□□□ -0.04
VPS33A-205ENST00000541169 SH2D7A6NKC9 451 aaPredicted RBP14.81□□□□□ -0.04
VPS33A-205ENST00000541169 SRRM4A7MD48 611 aaKnown RBP14.81□□□□□ -0.04
VPS33A-205ENST00000541169 FBXO24O75426 580 aa14.81□□□□□ -0.04
VPS33A-205ENST00000541169 OPN1MWP04001 364 aa14.81□□□□□ -0.04
VPS33A-205ENST00000541169 SERPINE2P07093 398 aa14.81□□□□□ -0.04
VPS33A-205ENST00000541169 SAA1P0DJI8 122 aaPredicted RBP14.81□□□□□ -0.04
VPS33A-205ENST00000541169 OPN1MW2P0DN77 364 aa14.81□□□□□ -0.04
VPS33A-205ENST00000541169 OPN1MW3P0DN78 364 aa14.81□□□□□ -0.04
VPS33A-205ENST00000541169 FAAP20Q6NZ36 180 aa14.81□□□□□ -0.04
VPS33A-205ENST00000541169 TEX38Q6PEX7 206 aa14.81□□□□□ -0.04
VPS33A-205ENST00000541169 HSPB9Q9BQS6 159 aa14.81□□□□□ -0.04
VPS33A-205ENST00000541169 BET1LQ9NYM9 111 aa14.81□□□□□ -0.04
VPS33A-205ENST00000541169 GPR132Q9UNW8 380 aa14.81□□□□□ -0.04
VPS33A-205ENST00000541169 H0Y980 276 aa14.8□□□□□ -0.04
VPS33A-205ENST00000541169 RAMP3O60896 148 aa14.8□□□□□ -0.04
VPS33A-205ENST00000541169 KBTBD11O94819 623 aa14.8□□□□□ -0.04
VPS33A-205ENST00000541169 CNIH1O95406 144 aa14.8□□□□□ -0.04
VPS33A-205ENST00000541169 IL7P13232 177 aa14.8□□□□□ -0.04
VPS33A-205ENST00000541169 BAK1Q16611 211 aa14.8□□□□□ -0.04
VPS33A-205ENST00000541169 PRSS8Q16651 343 aa14.8□□□□□ -0.04
VPS33A-205ENST00000541169 TMEM95Q3KNT9 176 aa14.8□□□□□ -0.04
VPS33A-205ENST00000541169 AKIRIN2Q53H80 203 aa14.8□□□□□ -0.04
VPS33A-205ENST00000541169 PUSL1Q8N0Z8 303 aaKnown RBP14.8□□□□□ -0.04
VPS33A-205ENST00000541169 SGMS2Q8NHU3 365 aa14.8□□□□□ -0.04
VPS33A-205ENST00000541169 TMEM167AQ8TBQ9 72 aa14.8□□□□□ -0.04
VPS33A-205ENST00000541169 GPHA2Q96T91 129 aa14.8□□□□□ -0.04
VPS33A-205ENST00000541169 STAB1Q9NY15 2570 aa14.8□□□□□ -0.04
VPS33A-205ENST00000541169 C3orf85A0A1B0GTC6 90 aa14.79□□□□□ -0.04
VPS33A-205ENST00000541169 CA2P00918 260 aa14.79□□□□□ -0.04
VPS33A-205ENST00000541169 SLC6A1P30531 599 aa14.79□□□□□ -0.04
VPS33A-205ENST00000541169 ZNF846Q147U1 533 aa14.79□□□□□ -0.04
VPS33A-205ENST00000541169 FXYD3Q14802 87 aa14.79□□□□□ -0.04
VPS33A-205ENST00000541169 DMBX1Q8NFW5 382 aa14.79□□□□□ -0.04
VPS33A-205ENST00000541169 ARPC1AQ92747 370 aa14.79□□□□□ -0.04
VPS33A-205ENST00000541169 TSC22D3Q99576 134 aa14.79□□□□□ -0.04
VPS33A-205ENST00000541169 SDHCQ99643 169 aaPredicted RBP14.79□□□□□ -0.04
VPS33A-205ENST00000541169 PARP11Q9NR21 331 aa14.79□□□□□ -0.04
VPS33A-205ENST00000541169 KCNIP3Q9Y2W7 256 aa14.79□□□□□ -0.04
VPS33A-205ENST00000541169 TRAV41A0A0B4J266 112 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 TEX13DA0A0J9YY54 714 aaPredicted RBP14.78□□□□□ -0.04
VPS33A-205ENST00000541169 MARCH11A6NNE9 402 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 M0QZ24 198 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 FCN1O00602 326 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 ATP6V0E1O15342 81 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 ELANEP08246 267 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 LPAR6P43657 344 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 FOXE3Q13461 319 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 RBMS2Q15434 407 aaKnown RBP14.78□□□□□ -0.04
VPS33A-205ENST00000541169 NDUFA11Q86Y39 141 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 ABHD5Q8WTS1 349 aa14.78□□□□□ -0.04
VPS33A-205ENST00000541169 MRGPRFQ96AM1 343 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms