RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 HIGD1AQ9Y241 93 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 SOX21Q9Y651 276 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-216ENST00000523088 HS3ST3B1Q9Y662 390 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 POLEQ07864 2286 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 COL12A1Q99715 3063 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 MAST4O15021 2626 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 USP9YO00507 2555 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-216ENST00000523088 A0A087WWL8 130 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 NSG1A0A0A6YYJ2 146 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 TCRBV7S3A2A0A539 114 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 H0YGG7 62 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 K7EM74 188 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 XKRYO14609 159 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 ARPC2O15144 300 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 HYPMO75409 117 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 CRLF1O75462 422 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 HPXP02790 462 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 REG1AP05451 166 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 LINC00032P0C843 101 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 VSIG10L2P0DP72 767 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 GP9P14770 177 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 SRD5A1P18405 259 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 CRISP3P54108 245 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF121P58317 390 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-216ENST00000523088 FMODQ06828 376 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 TESK1Q15569 626 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 TIGITQ495A1 244 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 C17orf64Q86WR6 236 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 FAM90A1Q86YD7 464 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 ZDHHC22Q8N966 263 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 Q8NA96 180 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 TMEM178AQ8NBL3 297 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF740Q8NDX6 193 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 OR1F12Q8NHA8 337 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 TMEM170AQ8WVE7 144 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 C16orf92Q96LL3 132 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 HIST1H2AAQ96QV6 131 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 GPR21Q99679 349 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 MCHR1Q99705 422 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 SPIN2AQ99865 258 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 SPIN2BQ9BPZ2 258 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 PYGO2Q9BRQ0 406 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 GGTLC1Q9BX51 225 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 SLC35B3Q9H1N7 401 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 MAGIXQ9H6Y5 334 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 GPATCH2Q9NW75 528 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 SLC25A37Q9NYZ2 338 aa6.34□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF443Q9Y2A4 671 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-216ENST00000523088 USP9XQ93008 2570 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-216ENST00000523088 DIDO1Q9BTC0 2240 aaKnown RBP6.34□□□□□ -1.39
HDAC3-216ENST00000523088 TRAV17A0A0B4J275 112 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-216ENST00000523088 M0R1X1 148 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 ETV2O00321 342 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-216ENST00000523088 RER1O15258 196 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 CRXO43186 299 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-216ENST00000523088 OR2H2O95918 312 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 CD1AP06126 327 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 RPL7P18124 248 aaKnown RBP6.33□□□□□ -1.4
HDAC3-216ENST00000523088 GRPRP30550 384 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 GZMMP51124 257 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 SEC11AP67812 179 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 ID3Q02535 119 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 HLA-DRB5Q30154 266 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 GGTA1PQ4G0N0 100 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 TP53I3Q53FA7 332 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 FFAR4Q5NUL3 377 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 FNDC7Q5VTL7 733 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 AADACL3Q5VUY0 350 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 SPSB3Q6PJ21 355 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 TMEM91Q6ZNR0 172 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 CEACAM19Q7Z692 300 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 MEX3DQ86XN8 651 aaKnown RBP6.33□□□□□ -1.4
HDAC3-216ENST00000523088 TOMM5Q8N4H5 51 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 TMEM86BQ8N661 226 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 TEX29Q8N6K0 151 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 OR2M3Q8NG83 312 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 CNIH3Q8TBE1 160 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 OR51E1Q8TCB6 317 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 TWIST2Q8WVJ9 160 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 RDH5Q92781 318 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 OR2A5Q96R48 311 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 FEVQ99581 238 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 SLC25A21Q9BQT8 299 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-216ENST00000523088 ACER3Q9NUN7 267 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 NDUFB11Q9NX14 153 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 SIGLEC8Q9NYZ4 499 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 DOPEY1Q5JWR5 2465 aa6.33□□□□□ -1.4
HDAC3-216ENST00000523088 TMEM212A6NML5 194 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 UMAD1C9J7I0 102 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 CXCL1P09341 107 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 NHLRC4P0CG21 123 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-216ENST00000523088 PGA4P0DJD7 388 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 PGA5P0DJD9 388 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 GNLYP22749 145 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 AADACP22760 399 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 CNTFRP26992 372 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 FAM3BP58499 235 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-216ENST00000523088 ADAM8P78325 824 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 PNRC1Q12796 327 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms