RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 RHOXF1Q8NHV9 184 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 LMX1AQ8TE12 382 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 RAB2BQ8WUD1 216 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 RTN4IP1Q8WWV3 396 aaPredicted RBP2.8□□□□□ -1.96
SKP1-209ENST00000522552 PHYHIPLQ96FC7 376 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 IP6K3Q96PC2 410 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 DOHHQ9BU89 302 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 TMEM126AQ9H061 195 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 RPP21Q9H633 154 aaKnown RBP2.8□□□□□ -1.96
SKP1-209ENST00000522552 GPR84Q9NQS5 396 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 SPANXCQ9NY87 97 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 AK3Q9UIJ7 227 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 RPUSD1Q9UJJ7 312 aaKnown RBP2.8□□□□□ -1.96
SKP1-209ENST00000522552 HSPB8Q9UJY1 196 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 CD109Q6YHK3 1445 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 RALGAPA2Q2PPJ7 1873 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 TONSLQ96HA7 1378 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 NUP205Q92621 2012 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 A0A1B0GX51 115 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 ATP6V1G2-DDX39BF2Z307 99 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 TRAPPC2LH3BP13 241 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 J3KT08 172 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 BPY2O14599 106 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 BANF1O75531 89 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 SCO1O75880 301 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 ZNF688P0C7X2 276 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 SMIM10L2AP0DMW4 78 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 SMIM10L2BP0DMW5 78 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 ZNF823P16415 610 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 RPS4Y1P22090 263 aaKnown RBP2.79□□□□□ -1.96
SKP1-209ENST00000522552 CA5AP35218 305 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 NUDT1P36639 197 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 TAF6P49848 677 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 HTR4Q13639 388 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 WDR59Q6PJI9 974 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 Q6Q795 121 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 Q8N7P7 452 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 OR8A1Q8NGG7 326 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 SLC7A6Q92536 515 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 EXOSC8Q96B26 276 aaKnown RBP2.79□□□□□ -1.96
SKP1-209ENST00000522552 TRIB3Q96RU7 358 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 C20orf27Q9GZN8 174 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 ZNF286AQ9HBT8 521 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 CSAG2Q9Y5P2 127 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 SSH2Q76I76 1423 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 DOCK8Q8NF50 2099 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 ZCCHC11Q5TAX3 1644 aaKnown RBP2.79□□□□□ -1.96
SKP1-209ENST00000522552 CARMIL3Q8ND23 1372 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 TDRD6O60522 2096 aaKnown RBP2.79□□□□□ -1.96
SKP1-209ENST00000522552 GPATCH8Q9UKJ3 1502 aaKnown RBP2.79□□□□□ -1.96
SKP1-209ENST00000522552 TRBV20OR9-2A0A075B6H5 130 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 TRBV19A0A075B6N1 114 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 TRAV36DV7A0A075B6V5 113 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 IGHV3-49A0A0A0MS15 119 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 TMEM189A5PLL7 270 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 CCDC160A6NGH7 325 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 CYB5BO43169 146 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 DLEU1O43261 78 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 ADRA2AP08913 450 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 TGFBR1P36897 503 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 OPRK1P41145 380 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 POLR2HP52434 150 aaKnown RBP2.79□□□□□ -1.96
SKP1-209ENST00000522552 ELF3P78545 371 aaPredicted RBP2.79□□□□□ -1.96
SKP1-209ENST00000522552 LOXL1Q08397 574 aaPredicted RBP2.79□□□□□ -1.96
SKP1-209ENST00000522552 ENDOGQ14249 297 aaKnown RBP2.79□□□□□ -1.96
SKP1-209ENST00000522552 WHAMMP3Q1A5X7 153 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 SCGB2B2Q4G0G5 96 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 C9orf129Q5T035 196 aaKnown RBP2.79□□□□□ -1.96
SKP1-209ENST00000522552 WDR86Q86TI4 376 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 LINC01551Q86U37 167 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 NR2C2APQ86WQ0 139 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 Q8N976 141 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 MRPL30Q8TCC3 161 aaKnown RBP2.79□□□□□ -1.96
SKP1-209ENST00000522552 VGLL1Q99990 258 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 WDR61Q9GZS3 305 aaKnown RBP2.79□□□□□ -1.96
SKP1-209ENST00000522552 TVP23BQ9NYZ1 205 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 AMMECR1Q9Y4X0 333 aaPredicted RBP2.79□□□□□ -1.96
SKP1-209ENST00000522552 PRSS21Q9Y6M0 314 aa2.79□□□□□ -1.96
SKP1-209ENST00000522552 OTOFQ9HC10 1997 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 BORCS7-ASMTA0A0B4J1R7 106 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 A8MWL6 223 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 IFNA7P01567 189 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 UBBP0CG47 229 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 MPC1LP0DKB6 136 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 OPRM1P35372 400 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 GABRA2P47869 451 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 BSPH1Q075Z2 132 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 DHRS2Q13268 280 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 ZC2HC1BQ5TFG8 222 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 GLT8D1Q68CQ7 371 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 TIFABQ6ZNK6 161 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 LRRC28Q86X40 367 aaPredicted RBP2.78□□□□□ -1.96
SKP1-209ENST00000522552 TYMSOSQ8TAI1 123 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 ADAT3Q96EY9 351 aaPredicted RBP2.78□□□□□ -1.96
SKP1-209ENST00000522552 CHCHD7Q9BUK0 85 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 HMG20AQ9NP66 347 aa2.78□□□□□ -1.96
SKP1-209ENST00000522552 CCDC171Q6TFL3 1326 aa2.78□□□□□ -1.97
SKP1-209ENST00000522552 ADAMTSL1Q8N6G6 1762 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms