RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 TINAGL1Q9GZM7 467 aaPredicted RBP13.13□□□□□ -0.31
SQLE-205ENST00000521232 ZNF256Q9Y2P7 627 aaPredicted RBP13.13□□□□□ -0.31
SQLE-205ENST00000521232 MRPS7Q9Y2R9 242 aaKnown RBP13.13□□□□□ -0.31
SQLE-205ENST00000521232 C13orf42A0A1B0GVH6 325 aa13.12□□□□□ -0.31
SQLE-205ENST00000521232 SAA1P0DJI8 122 aaPredicted RBP13.12□□□□□ -0.31
SQLE-205ENST00000521232 FCGR2CP31995 323 aa13.12□□□□□ -0.31
SQLE-205ENST00000521232 CBX5P45973 191 aa13.12□□□□□ -0.31
SQLE-205ENST00000521232 BRWD1-AS2P59051 145 aa13.12□□□□□ -0.31
SQLE-205ENST00000521232 LSM3P62310 102 aaKnown RBP13.12□□□□□ -0.31
SQLE-205ENST00000521232 MSMO1Q15800 293 aa13.12□□□□□ -0.31
SQLE-205ENST00000521232 TNXAQ16473 311 aa13.12□□□□□ -0.31
SQLE-205ENST00000521232 ZNF66Q6ZN08 573 aa13.12□□□□□ -0.31
SQLE-205ENST00000521232 SRSF12Q8WXF0 261 aaKnown RBP13.12□□□□□ -0.31
SQLE-205ENST00000521232 ZNF430Q9H8G1 570 aaPredicted RBP13.12□□□□□ -0.31
SQLE-205ENST00000521232 RANGRFQ9HD47 186 aaPredicted RBP13.12□□□□□ -0.31
SQLE-205ENST00000521232 CREBL2O60519 120 aaPredicted RBP13.11□□□□□ -0.31
SQLE-205ENST00000521232 SAP30O75446 220 aa13.11□□□□□ -0.31
SQLE-205ENST00000521232 PTHLHP12272 177 aa13.11□□□□□ -0.31
SQLE-205ENST00000521232 UBE2NLQ5JXB2 153 aa13.11□□□□□ -0.31
SQLE-205ENST00000521232 VAX1Q5SQQ9 334 aa13.11□□□□□ -0.31
SQLE-205ENST00000521232 MMD2Q8IY49 270 aa13.11□□□□□ -0.31
SQLE-205ENST00000521232 ADAD2Q8NCV1 583 aaKnown RBP13.11□□□□□ -0.31
SQLE-205ENST00000521232 ACOT12Q8WYK0 555 aa13.11□□□□□ -0.31
SQLE-205ENST00000521232 SNAPC3Q92966 411 aa13.11□□□□□ -0.31
SQLE-205ENST00000521232 USMG5Q96IX5 58 aa13.11□□□□□ -0.31
SQLE-205ENST00000521232 PHB2Q99623 299 aa13.11□□□□□ -0.31
SQLE-205ENST00000521232 CCL28Q9NRJ3 127 aa13.11□□□□□ -0.31
SQLE-205ENST00000521232 PPYP01298 95 aa13.1□□□□□ -0.31
SQLE-205ENST00000521232 OR9G9P0C7N8 305 aa13.1□□□□□ -0.31
SQLE-205ENST00000521232 OR2B11Q5JQS5 317 aa13.1□□□□□ -0.31
SQLE-205ENST00000521232 ZBTB34Q8NCN2 500 aa13.1□□□□□ -0.31
SQLE-205ENST00000521232 OR5AP2Q8NGF4 316 aa13.1□□□□□ -0.31
SQLE-205ENST00000521232 OR13F1Q8NGS4 319 aa13.1□□□□□ -0.31
SQLE-205ENST00000521232 OR4S2Q8NH73 311 aa13.1□□□□□ -0.31
SQLE-205ENST00000521232 TCTEX1D2Q8WW35 142 aa13.1□□□□□ -0.31
SQLE-205ENST00000521232 GIMAP1Q8WWP7 306 aa13.1□□□□□ -0.31
SQLE-205ENST00000521232 SLC25A46Q96AG3 418 aa13.1□□□□□ -0.31
SQLE-205ENST00000521232 COA4Q9NYJ1 87 aa13.1□□□□□ -0.31
SQLE-205ENST00000521232 TAS2R8Q9NYW2 309 aa13.1□□□□□ -0.31
SQLE-205ENST00000521232 ACTL6BO94805 426 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 OR2A4O95047 310 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 APELAP0DMC3 54 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 ZP3P21754 424 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 DYRK1AQ13627 763 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 C11orf87Q6NUJ2 197 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 ZNF343Q6P1L6 599 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 VKORC1L1Q8N0U8 176 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 PUSL1Q8N0Z8 303 aaKnown RBP13.09□□□□□ -0.31
SQLE-205ENST00000521232 TTC9CQ8N5M4 171 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 SAMD12Q8N8I0 201 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 VSTM2AQ8TAG5 236 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 SECTM1Q8WVN6 248 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 KCTD12Q96CX2 325 aaKnown RBP13.09□□□□□ -0.31
SQLE-205ENST00000521232 OR2A7Q96R45 310 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 SPIN2AQ99865 258 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 SPIN2BQ9BPZ2 258 aa13.09□□□□□ -0.31
SQLE-205ENST00000521232 TENM3Q9P273 2699 aa13.08□□□□□ -0.31
SQLE-205ENST00000521232 ANKRD34BA5PLL1 514 aa13.08□□□□□ -0.32
SQLE-205ENST00000521232 RBMXL2O75526 392 aaKnown RBP13.08□□□□□ -0.32
SQLE-205ENST00000521232 FCER2P06734 321 aa13.08□□□□□ -0.32
SQLE-205ENST00000521232 NHLRC4P0CG21 123 aaPredicted RBP13.08□□□□□ -0.32
SQLE-205ENST00000521232 KIR2DS2P43631 304 aa13.08□□□□□ -0.32
SQLE-205ENST00000521232 KLF5Q13887 457 aaPredicted RBP13.08□□□□□ -0.32
SQLE-205ENST00000521232 TMEM69Q5SWH9 247 aa13.08□□□□□ -0.32
SQLE-205ENST00000521232 DHRS11Q6UWP2 260 aa13.08□□□□□ -0.32
SQLE-205ENST00000521232 OR6Q1Q8NGQ2 317 aa13.08□□□□□ -0.32
SQLE-205ENST00000521232 TMEM167AQ8TBQ9 72 aa13.08□□□□□ -0.32
SQLE-205ENST00000521232 OR4C12Q96R67 309 aa13.08□□□□□ -0.32
SQLE-205ENST00000521232 GPHA2Q96T91 129 aa13.08□□□□□ -0.32
SQLE-205ENST00000521232 FUNDC2Q9BWH2 189 aa13.08□□□□□ -0.32
SQLE-205ENST00000521232 PEF1Q9UBV8 284 aaKnown RBP13.08□□□□□ -0.32
SQLE-205ENST00000521232 ANAPC10Q9UM13 185 aa13.08□□□□□ -0.32
SQLE-205ENST00000521232 HUWE1Q7Z6Z7 4374 aaKnown RBP13.08□□□□□ -0.32
SQLE-205ENST00000521232 TRBV9A0A0B4J1U6 114 aa13.07□□□□□ -0.32
SQLE-205ENST00000521232 MEIS3P1A6NDR6 274 aa13.07□□□□□ -0.32
SQLE-205ENST00000521232 MPPED1O15442 326 aa13.07□□□□□ -0.32
SQLE-205ENST00000521232 TNFSF12O43508 249 aa13.07□□□□□ -0.32
SQLE-205ENST00000521232 KBTBD11O94819 623 aa13.07□□□□□ -0.32
SQLE-205ENST00000521232 HRASP01112 189 aa13.07□□□□□ -0.32
SQLE-205ENST00000521232 SPNP16150 400 aa13.07□□□□□ -0.32
SQLE-205ENST00000521232 TAS2R20P59543 309 aa13.07□□□□□ -0.32
SQLE-205ENST00000521232 ELOVL1Q9BW60 279 aa13.07□□□□□ -0.32
SQLE-205ENST00000521232 SLC5A7Q9GZV3 580 aa13.07□□□□□ -0.32
SQLE-205ENST00000521232 RBFOX2O43251 390 aaKnown RBP eCLIP13.06□□□□□ -0.32
SQLE-205ENST00000521232 LY86O95711 162 aa13.06□□□□□ -0.32
SQLE-205ENST00000521232 NAT1P18440 290 aa13.06□□□□□ -0.32
SQLE-205ENST00000521232 MAS1LP35410 378 aa13.06□□□□□ -0.32
SQLE-205ENST00000521232 NCS1P62166 190 aa13.06□□□□□ -0.32
SQLE-205ENST00000521232 DEFA5Q01523 94 aa13.06□□□□□ -0.32
SQLE-205ENST00000521232 ZNF45Q02386 682 aa13.06□□□□□ -0.32
SQLE-205ENST00000521232 C10orf55Q5SWW7 151 aa13.06□□□□□ -0.32
SQLE-205ENST00000521232 SLC25A42Q86VD7 318 aa13.06□□□□□ -0.32
SQLE-205ENST00000521232 CMTM3Q96MX0 182 aa13.06□□□□□ -0.32
SQLE-205ENST00000521232 AIFM2Q9BRQ8 373 aa13.06□□□□□ -0.32
SQLE-205ENST00000521232 AKIP1Q9NQ31 210 aa13.06□□□□□ -0.32
SQLE-205ENST00000521232 IFT46Q9NQC8 304 aa13.06□□□□□ -0.32
SQLE-205ENST00000521232 FAM223BA6NKX1 122 aa13.05□□□□□ -0.32
SQLE-205ENST00000521232 TEX22C9J3V5 150 aa13.05□□□□□ -0.32
SQLE-205ENST00000521232 E7EUB6 86 aa13.05□□□□□ -0.32
SQLE-205ENST00000521232 PRH1P02810 166 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms