RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 WSB1Q9Y6I7 421 aa3.74□□□□□ -1.81
SDCBP-207ENST00000520168 HERC1Q15751 4861 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 SMCO3A2RU48 225 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 LINC01548A6NM66 108 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 GABRPO00591 440 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 CCSO14618 274 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 PDCD5O14737 125 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 HSD17B6O14756 317 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 RGS5O15539 181 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 CYB5AP00167 134 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 MOSP00540 346 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 IGLV3-1P01715 115 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 GAPDHP04406 335 aaKnown RBP3.73□□□□□ -1.81
SDCBP-207ENST00000520168 HSPB1P04792 205 aaKnown RBP3.73□□□□□ -1.81
SDCBP-207ENST00000520168 PPIFP30405 207 aaKnown RBP3.73□□□□□ -1.81
SDCBP-207ENST00000520168 MEOX2P50222 304 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 NKX2-5P52952 324 aaPredicted RBP3.73□□□□□ -1.81
SDCBP-207ENST00000520168 IFITM3Q01628 133 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 ZNF85Q03923 595 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 KIAA0141Q14154 515 aaPredicted RBP3.73□□□□□ -1.81
SDCBP-207ENST00000520168 ZNF146Q15072 292 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 ACSM3Q53FZ2 586 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 TMEM42Q69YG0 159 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 CEMP1Q6PRD7 247 aaPredicted RBP3.73□□□□□ -1.81
SDCBP-207ENST00000520168 LINC00322Q6ZN03 302 aaPredicted RBP3.73□□□□□ -1.81
SDCBP-207ENST00000520168 CEACAM19Q7Z692 300 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 CATSPERDQ86XM0 798 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 SERPINA12Q8IW75 414 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 Q8N402 240 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 Q8N6K4 173 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 TCTEX1D1Q8N7M0 179 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 CCDC54Q8NEL0 328 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 DNAAF1Q8NEP3 725 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 OR10A7Q8NGE5 316 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 OR56B1Q8NGI3 324 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 OR2K2Q8NGT1 345 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 OR10X1Q8NGY0 326 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 OTOSQ8NHW6 89 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 ZNRF4Q8WWF5 429 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 ASB17Q8WXJ9 295 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 GHSRQ92847 366 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 EMG1Q92979 244 aaKnown RBP3.73□□□□□ -1.81
SDCBP-207ENST00000520168 DIRAS2Q96HU8 199 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 C4orf36Q96KX1 117 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 S1PR3Q99500 378 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 PRRT1Q99946 306 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 FAM110AQ9BQ89 295 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 SOSTQ9BQB4 213 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 CHST6Q9GZX3 395 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 MOB1AQ9H8S9 216 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 ISG20L2Q9H9L3 353 aaKnown RBP3.73□□□□□ -1.81
SDCBP-207ENST00000520168 ING3Q9NXR8 418 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 SLC2A8Q9NY64 477 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 UBQLN2Q9UHD9 624 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 ZNF107Q9UII5 783 aaPredicted RBP3.73□□□□□ -1.81
SDCBP-207ENST00000520168 PLA2G2DQ9UNK4 145 aa3.73□□□□□ -1.81
SDCBP-207ENST00000520168 IGHV1-3A0A0C4DH29 117 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 KBTBD11-OT1A0A1B0GTJ5 212 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 A0A1B0GV72 72 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 TMEM269A0A1B0GVZ9 245 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 ODAMA1E959 279 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 FAM90A10PA6NDY2 464 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 GAGE10A6NGK3 116 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 TMEM238C9JI98 176 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 SH2D1BO14796 132 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 TCAPO15273 167 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 DEDDO75618 318 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 SC5DO75845 299 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 RGS11O94810 467 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 KDM4BO94953 1096 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 LALBAP00709 142 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 IFNA4P05014 189 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 GYPBP06028 91 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 MRPL3P09001 348 aaKnown RBP3.72□□□□□ -1.81
SDCBP-207ENST00000520168 ZP3P21754 424 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 NFYBP25208 207 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 IL3RAP26951 378 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 MAS1LP35410 378 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 OR3A1P47881 315 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 TCTAP57738 103 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 RPS16P62249 146 aaKnown RBP3.72□□□□□ -1.81
SDCBP-207ENST00000520168 MXD1Q05195 221 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 TNFRSF9Q07011 255 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 GAGE1Q13065 139 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 CDK5R1Q15078 307 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 PYDC2Q56P42 97 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 PAN3Q58A45 887 aaKnown RBP3.72□□□□□ -1.81
SDCBP-207ENST00000520168 LINC01590Q5TEZ4 76 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 FAM131AQ6UXB0 335 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 BAIAP2L2Q6UXY1 529 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 MOB3BQ86TA1 216 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 ANGPTL5Q86XS5 388 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 TMEM217Q8N7C4 229 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 ZFP41Q8N8Y5 198 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 CHST4Q8NCG5 386 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 OR52N4Q8NGI2 321 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 OR51E1Q8TCB6 317 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 NEK7Q8TDX7 302 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 THEM6Q8WUY1 208 aa3.72□□□□□ -1.81
SDCBP-207ENST00000520168 RGP1Q92546 391 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms