RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 HCFC1P51610 2035 aa21.74■■□□□ 1.07
COL13A1-210ENST00000517713 TRAV3A0A0B4J244 114 aa21.73■■□□□ 1.07
COL13A1-210ENST00000517713 SFTA3P0C7M3 94 aa21.73■■□□□ 1.07
COL13A1-210ENST00000517713 RAB39BQ96DA2 213 aa21.73■■□□□ 1.07
COL13A1-210ENST00000517713 PSMG3Q9BT73 122 aaPredicted RBP21.73■■□□□ 1.07
COL13A1-210ENST00000517713 A0A1B0GV50 99 aa21.73■■□□□ 1.07
COL13A1-210ENST00000517713 C9JQL5 133 aa21.73■■□□□ 1.07
COL13A1-210ENST00000517713 LY86O95711 162 aa21.73■■□□□ 1.07
COL13A1-210ENST00000517713 H2AFB1P0C5Y9 115 aa21.73■■□□□ 1.07
COL13A1-210ENST00000517713 PEA15Q15121 130 aa21.73■■□□□ 1.07
COL13A1-210ENST00000517713 OR10P1Q8NGE3 313 aa21.73■■□□□ 1.07
COL13A1-210ENST00000517713 RHOVQ96L33 236 aa21.73■■□□□ 1.07
COL13A1-210ENST00000517713 SCRT1Q9BWW7 348 aa21.73■■□□□ 1.07
COL13A1-210ENST00000517713 GUCA2BQ16661 112 aa21.72■■□□□ 1.07
COL13A1-210ENST00000517713 PDLIM3Q53GG5 364 aaPredicted RBP21.72■■□□□ 1.07
COL13A1-210ENST00000517713 ZNF833PQ6ZTB9 187 aa21.72■■□□□ 1.07
COL13A1-210ENST00000517713 PINX1Q96BK5 328 aaKnown RBP21.72■■□□□ 1.07
COL13A1-210ENST00000517713 NKX6-2Q9C056 277 aaPredicted RBP21.72■■□□□ 1.07
COL13A1-210ENST00000517713 UBE2L5PA0A1B0GUS4 154 aa21.72■■□□□ 1.07
COL13A1-210ENST00000517713 FAM157AC9JC47 383 aa21.72■■□□□ 1.07
COL13A1-210ENST00000517713 EIF5A2Q9GZV4 153 aaKnown RBP21.72■■□□□ 1.07
COL13A1-210ENST00000517713 NCOR2Q9Y618 2525 aa21.71■■□□□ 1.07
COL13A1-210ENST00000517713 GPR37O15354 613 aa21.71■■□□□ 1.07
COL13A1-210ENST00000517713 FSTL3O95633 263 aa21.71■■□□□ 1.07
COL13A1-210ENST00000517713 HRASP01112 189 aa21.71■■□□□ 1.07
COL13A1-210ENST00000517713 DLX6P56179 175 aa21.71■■□□□ 1.07
COL13A1-210ENST00000517713 TLE4Q04727 773 aa21.71■■□□□ 1.07
COL13A1-210ENST00000517713 TMEM155Q4W5P6 130 aa21.71■■□□□ 1.07
COL13A1-210ENST00000517713 OR4A47Q6IF82 309 aa21.71■■□□□ 1.07
COL13A1-210ENST00000517713 ZNF429Q86V71 674 aa21.71■■□□□ 1.07
COL13A1-210ENST00000517713 TAF15Q92804 592 aaKnown RBP eCLIP21.71■■□□□ 1.07
COL13A1-210ENST00000517713 CLCC1Q96S66 551 aa21.71■■□□□ 1.07
COL13A1-210ENST00000517713 TMEM147Q9BVK8 224 aa21.71■■□□□ 1.07
COL13A1-210ENST00000517713 SLC35D1Q9NTN3 355 aa21.71■■□□□ 1.07
COL13A1-210ENST00000517713 GNB2P62879 340 aa21.7■■□□□ 1.06
COL13A1-210ENST00000517713 RTL8BQ17RB0 113 aa21.7■■□□□ 1.06
COL13A1-210ENST00000517713 SPSB3Q6PJ21 355 aa21.7■■□□□ 1.06
COL13A1-210ENST00000517713 PBDC1Q9BVG4 233 aa21.7■■□□□ 1.06
COL13A1-210ENST00000517713 RPS16P62249 146 aaKnown RBP21.7■■□□□ 1.06
COL13A1-210ENST00000517713 POU2AF1Q16633 256 aa21.7■■□□□ 1.06
COL13A1-210ENST00000517713 PUSL1Q8N0Z8 303 aaKnown RBP21.7■■□□□ 1.06
COL13A1-210ENST00000517713 CHD8Q9HCK8 2581 aa21.7■■□□□ 1.06
COL13A1-210ENST00000517713 C15orf61A6NNL5 157 aa21.69■■□□□ 1.06
COL13A1-210ENST00000517713 C15orf62A8K5M9 175 aa21.69■■□□□ 1.06
COL13A1-210ENST00000517713 IGHV2-70P01814 119 aa21.69■■□□□ 1.06
COL13A1-210ENST00000517713 RPP30P78346 268 aaKnown RBP21.69■■□□□ 1.06
COL13A1-210ENST00000517713 SERF2P84101 59 aa21.69■■□□□ 1.06
COL13A1-210ENST00000517713 DHRS7BQ6IAN0 325 aaPredicted RBP21.69■■□□□ 1.06
COL13A1-210ENST00000517713 C8orf31Q8N9H6 132 aa21.69■■□□□ 1.06
COL13A1-210ENST00000517713 RAB1BQ9H0U4 201 aa21.69■■□□□ 1.06
COL13A1-210ENST00000517713 HIPK2Q9H2X6 1198 aa21.69■■□□□ 1.06
COL13A1-210ENST00000517713 CBLN4Q9NTU7 201 aa21.69■■□□□ 1.06
COL13A1-210ENST00000517713 TRBV23-1A0A0A0MS06 115 aa21.68■■□□□ 1.06
COL13A1-210ENST00000517713 BTBD17A6NE02 478 aa21.68■■□□□ 1.06
COL13A1-210ENST00000517713 CCL20P78556 96 aa21.68■■□□□ 1.06
COL13A1-210ENST00000517713 OR13D1Q8NGV5 346 aa21.68■■□□□ 1.06
COL13A1-210ENST00000517713 RALYQ9UKM9 306 aaKnown RBP21.68■■□□□ 1.06
COL13A1-210ENST00000517713 J3QR06 171 aa21.68■■□□□ 1.06
COL13A1-210ENST00000517713 SCAF4O95104 1147 aaKnown RBP21.68■■□□□ 1.06
COL13A1-210ENST00000517713 ARG1P05089 322 aa21.68■■□□□ 1.06
COL13A1-210ENST00000517713 VDAC2P45880 294 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-210ENST00000517713 LINC00311Q8N616 119 aa21.68■■□□□ 1.06
COL13A1-210ENST00000517713 ZNF596Q8TC21 504 aa21.68■■□□□ 1.06
COL13A1-210ENST00000517713 SFT2D1Q8WV19 159 aa21.68■■□□□ 1.06
COL13A1-210ENST00000517713 RBMXL1Q96E39 390 aaKnown RBP21.68■■□□□ 1.06
COL13A1-210ENST00000517713 HEYLQ9NQ87 328 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-210ENST00000517713 TCF19Q9Y242 345 aa21.68■■□□□ 1.06
COL13A1-210ENST00000517713 FOXA2Q9Y261 457 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-210ENST00000517713 A0A1B0GW64 132 aa21.67■■□□□ 1.06
COL13A1-210ENST00000517713 SP5Q6BEB4 398 aaPredicted RBP21.67■■□□□ 1.06
COL13A1-210ENST00000517713 OR10X1Q8NGY0 326 aa21.67■■□□□ 1.06
COL13A1-210ENST00000517713 MRPL20Q9BYC9 149 aaKnown RBP21.67■■□□□ 1.06
COL13A1-210ENST00000517713 TMEM8BA6NDV4 472 aa21.67■■□□□ 1.06
COL13A1-210ENST00000517713 IGKV1-16P04430 117 aa21.67■■□□□ 1.06
COL13A1-210ENST00000517713 PPT1P50897 306 aa21.67■■□□□ 1.06
COL13A1-210ENST00000517713 RPRMQ9NS64 109 aa21.67■■□□□ 1.06
COL13A1-210ENST00000517713 TMEM14BQ9NUH8 114 aa21.67■■□□□ 1.06
COL13A1-210ENST00000517713 TIMM9Q9Y5J7 89 aa21.67■■□□□ 1.06
COL13A1-210ENST00000517713 DOCK11Q5JSL3 2073 aa21.66■■□□□ 1.06
COL13A1-210ENST00000517713 F12P00748 615 aaPredicted RBP21.66■■□□□ 1.06
COL13A1-210ENST00000517713 IFNA10P01566 189 aa21.66■■□□□ 1.06
COL13A1-210ENST00000517713 VWC2Q2TAL6 325 aa21.66■■□□□ 1.06
COL13A1-210ENST00000517713 ZNF841Q6ZN19 808 aa21.66■■□□□ 1.06
COL13A1-210ENST00000517713 VSIRQ9H7M9 311 aa21.66■■□□□ 1.06
COL13A1-210ENST00000517713 ANKHD1Q8IWZ3 2542 aaKnown RBP21.65■■□□□ 1.06
COL13A1-210ENST00000517713 RELNP78509 3460 aa21.65■■□□□ 1.06
COL13A1-210ENST00000517713 A0A087X0M5 115 aa21.65■■□□□ 1.06
COL13A1-210ENST00000517713 A0A1B0GX30 115 aa21.65■■□□□ 1.06
COL13A1-210ENST00000517713 HBE1P02100 147 aa21.65■■□□□ 1.06
COL13A1-210ENST00000517713 IGHV1-8P0DP01 117 aa21.65■■□□□ 1.06
COL13A1-210ENST00000517713 RAB2AP61019 212 aa21.65■■□□□ 1.06
COL13A1-210ENST00000517713 C4orf17Q53FE4 359 aa21.65■■□□□ 1.06
COL13A1-210ENST00000517713 CENPVQ7Z7K6 275 aaPredicted RBP21.65■■□□□ 1.06
COL13A1-210ENST00000517713 SNAPINO95295 136 aa21.65■■□□□ 1.06
COL13A1-210ENST00000517713 APOA2P02652 100 aa21.65■■□□□ 1.06
COL13A1-210ENST00000517713 HOXA1P49639 335 aaPredicted RBP21.65■■□□□ 1.06
COL13A1-210ENST00000517713 AVPI1Q5T686 147 aa21.65■■□□□ 1.06
COL13A1-210ENST00000517713 C11orf71Q6IPW1 123 aa21.65■■□□□ 1.06
COL13A1-210ENST00000517713 TMEM186Q96B77 213 aa21.65■■□□□ 1.06
COL13A1-210ENST00000517713 IL6RP08887 468 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms