RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 IGHV2-26A0A0B4J1V2 119 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 TRAV3A0A0B4J244 114 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 PMS2P5A8MQ11 134 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 A8MXK9 166 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 H0YJW9 148 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 LY6LH3BQJ8 138 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 M0R1W7 72 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 NDUFS7O75251 213 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 CST7O76096 145 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 CRYZL1O95825 349 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 HRASP01112 189 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 IGLV1-47P01700 117 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 IGKV1-16P04430 117 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 LIPFP07098 398 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 SEC11BP0C7V7 166 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 IAPPP10997 89 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 DYNLT3P51808 116 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 PRRX1P54821 245 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 SPCS3P61009 180 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 ERVK-16P61578 105 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 ARL16Q0P5N6 197 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 ZNF266Q14584 549 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 AANATQ16613 207 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 RTL8BQ17RB0 113 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 OR4A47Q6IF82 309 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 C1orf122Q6ZSJ8 110 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 HAPLN4Q86UW8 402 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 VKORC1L1Q8N0U8 176 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 PUSL1Q8N0Z8 303 aaKnown RBP4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 Q8N7P7 452 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 BEND2Q8NDZ0 799 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 OR1S2Q8NGQ3 325 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 OR5C1Q8NGR4 320 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 OR13D1Q8NGV5 346 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 OR10X1Q8NGY0 326 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 LYPD6BQ8NI32 183 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 RHOVQ96L33 236 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 CIB3Q96Q77 187 aaPredicted RBP4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 CITED4Q96RK1 184 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 ATP5SQ99766 215 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 NABP2Q9BQ15 211 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 AIFM2Q9BRQ8 373 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 SSBP3Q9BWW4 388 aaPredicted RBP4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 QTRT1Q9BXR0 403 aaKnown RBP4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 MRPL20Q9BYC9 149 aaKnown RBP4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 PARD6GQ9BYG4 376 aaPredicted RBP4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 SLC35D1Q9NTN3 355 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 TMEM140Q9NV12 185 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 FOXA2Q9Y261 457 aaPredicted RBP4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 CSPG4Q6UVK1 2322 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 CHD6Q8TD26 2715 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 USP9YO00507 2555 aaPredicted RBP4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 DOPEY2Q9Y3R5 2298 aa4.41□□□□□ -1.7
SCARNA20.4-201ENST00000516969 KMT2BQ9UMN6 2715 aaPredicted RBP4.4□□□□□ -1.7
SCARNA20.4-201ENST00000516969 LOC105371242A0A075B767 164 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 hCG_1809904A0A1W2PP81 198 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 A0A1W2PPE2 198 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 A0A1W2PR64 198 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 A0A1W2PRV1 198 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 C15orf61A6NNL5 157 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 C15orf62A8K5M9 175 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 BUB1B-PAK6H3BSN5 160 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 UPK2O00526 184 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 FBXO24O75426 580 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 DFFBO76075 338 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 IGHV2-5P01817 119 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ARG1P05089 322 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 FGF2P09038 288 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR8U8P0C7N1 319 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 METTL15P1P0C7V9 234 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 MDKP21741 143 aaPredicted RBP4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PRTN3P24158 256 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 IL3RAP26951 378 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 MC5RP33032 325 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 VDAC2P45880 294 aaPredicted RBP4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 GPR6P46095 362 aaPredicted RBP4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RAB5CP51148 216 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HSPE1P61604 102 aaKnown RBP4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 LMO4P61968 165 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 GNB2P62879 340 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PAX2Q02962 417 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TMEM267Q0VDI3 215 aaPredicted RBP4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 DIAPH2-AS1Q14236 149 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CLINT1Q14677 625 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HLA-DRB5Q30154 266 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TMEM177Q53S58 311 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SPANXN5Q5MJ07 72 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SP5Q6BEB4 398 aaPredicted RBP4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SSX9Q7RTT3 188 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HSD17B13Q7Z5P4 300 aaPredicted RBP4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 STX12Q86Y82 276 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PDPNQ86YL7 162 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 KIR3DL3Q8N743 410 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ZNF525Q8N782 197 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TMEM217Q8N7C4 229 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR11H6Q8NGC7 330 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR4P4Q8NGL7 312 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR4A16Q8NH70 328 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OSR1Q8TAX0 266 aaPredicted RBP4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 DTD1Q8TEA8 209 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms