RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 SCAF11Q99590 1463 aaKnown RBP0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 NUP160Q12769 1436 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 C5orf49A4QMS7 147 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 FAM25EA8MYX2 175 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 IBA57-AS1B1ANH7 110 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 H7C2G1 150 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 KLRC4O43908 158 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 NEMFO60524 1076 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 ADAP1O75689 374 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 LGALS1P09382 135 aaKnown RBP0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 IL9P15248 144 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 CXCL3P19876 107 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 GRPRP30550 384 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 CCR7P32248 378 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 CA5AP35218 305 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 TPI1P60174 286 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 HLA-DRB3P79483 266 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 AKR1C1Q04828 323 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 SMAGPQ0VAQ4 97 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 PMS2P3Q13401 168 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 ARHGAP11BQ3KRB8 267 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 SLC36A2Q495M3 483 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 SDHAF4Q5VUM1 108 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 DCXRQ7Z4W1 244 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 KTN1-AS1Q86SY8 53 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 BOD1L2Q8IYS8 172 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 PACRGLQ8N7B6 248 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 ATP6V1C2Q8NEY4 427 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 SLC37A2Q8TED4 501 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 IMMP2LQ96T52 175 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 CCL13Q99616 98 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 ADAT1Q9BUB4 502 aaKnown RBP0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 MS4A6AQ9H2W1 248 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 EURLQ9NYK6 297 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 CD300AQ9UGN4 299 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 TIMM9Q9Y5J7 89 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 LHFPL6Q9Y693 200 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 CCDC88CQ9P219 2028 aa0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 DICER1Q9UPY3 1922 aaKnown RBP0.25□□□□□ -2.37
RNU2-56P-201ENST00000516826 ZFHX2Q9C0A1 2572 aaPredicted RBP0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 COL6A6A6NMZ7 2263 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 TINCRA0A1B0GVN0 87 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 HMSDA8MTL9 139 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 HSBP1L1C9JCN9 74 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 SMLR1H3BR10 107 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 CRPP02741 224 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 TFPTP0C1Z6 253 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 PSMB6P28072 239 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 RPL28P46779 137 aaKnown RBP0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 AQP4P55087 323 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 CLDN12P56749 244 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 RAB14P61106 215 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 POLR2GP62487 172 aaKnown RBP eCLIP0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 HIST1H4AP62805 103 aaKnown RBP0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 TNFAIP6P98066 277 aaPredicted RBP0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 LRRC75BQ2VPJ9 315 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 DNAL1Q4LDG9 190 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 SBSNQ6UWP8 590 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 ZNF705AQ6ZN79 300 aaPredicted RBP0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 C7orf65Q6ZTY9 151 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 SLC36A1Q7Z2H8 476 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 C15orf53Q8NAA6 179 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 OR7G1Q8NGA0 311 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 SGMS2Q8NHU3 365 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 JOSD2Q8TAC2 188 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 HAVCR2Q8TDQ0 301 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 SMIM19Q96E16 107 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 GNPNAT1Q96EK6 184 aaPredicted RBP0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 NMNAT3Q96T66 252 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 TMEM109Q9BVC6 243 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 CST9LQ9H4G1 147 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 RSL24D1Q9UHA3 163 aaKnown RBP0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 GMEB1Q9Y692 573 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 WDR90Q96KV7 1748 aa0.24□□□□□ -2.37
RNU2-56P-201ENST00000516826 TONSLQ96HA7 1378 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 MUC5ACP98088 5654 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 CHD2O14647 1828 aaKnown RBP0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 TRAV38-1A0A0B4J264 116 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 MEIS3P1A6NDR6 274 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 FABP12A6NFH5 140 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 H3BT86 120 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 COX7A2LO14548 114 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 ATP8B1O43520 1251 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 HCRTO43612 131 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 CREBL2O60519 120 aaPredicted RBP0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 HPGDSO60760 199 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 NDUFS6O75380 124 aaKnown RBP0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 NSA2O95478 260 aaKnown RBP0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 HLA-DRAP01903 254 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 IL6P05231 212 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 KRT7P08729 469 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 RD3LP0DJH9 198 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 CD40LGP29965 261 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 CXCR4P61073 352 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 AP1S1P61966 158 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 CDK5R1Q15078 307 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 ELOBQ15370 118 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 TNFAIP8L3Q5GJ75 292 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 C1orf194Q5T5A4 169 aa0.23□□□□□ -2.37
RNU2-56P-201ENST00000516826 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms