RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 SNAPC3Q92966 411 aa2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 CMSS1Q9BQ75 279 aaKnown RBP2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 MRPL20Q9BYC9 149 aaKnown RBP2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 ANKRD60Q9BZ19 345 aa2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 FBXL15Q9H469 300 aa2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 LINC00574Q9H8X3 128 aa2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 S100A14Q9HCY8 104 aa2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 FGF20Q9NP95 211 aaPredicted RBP2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 C12orf4Q9NQ89 552 aa2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 AASSQ9UDR5 926 aa2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 BLOC1S6Q9UL45 172 aa2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 PRELID3BQ9Y3B1 194 aa2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 TPRKBQ9Y3C4 175 aa2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 NOTCH3Q9UM47 2321 aa2.92□□□□□ -1.94
HMGN1P11-201ENST00000508668 A0A075B6Q4 140 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 SAA2-SAA4A0A096LPE2 208 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 G3V318 75 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 C15orf65H3BRN8 121 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 H3BUA1 57 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 J3QRE1 110 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 M0R1X1 148 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 BET1O15155 118 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 OGG1O15527 345 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 DENRO43583 198 aaKnown RBP2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 AIREO43918 545 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 CA2P00918 260 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 FRMD6-AS1P0C7T7 363 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 LIMS3P0CW19 117 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 LIMS4P0CW20 117 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 SAA2P0DJI9 122 aaPredicted RBP2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 SPNP16150 400 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 CD36P16671 472 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 SRMP19623 302 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 PSMB8P28062 276 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 S100GP29377 79 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 OR3A3P47888 321 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 F2RL1P55085 397 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 ARPC4P59998 168 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 CX3CL1P78423 397 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 ATP5G2Q06055 141 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 BAK1Q16611 211 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 GUCA2BQ16661 112 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 ACSM3Q53FZ2 586 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 AKIRIN2Q53H80 203 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 ZFAND6Q6FIF0 208 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 ZNF562Q6V9R5 426 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 ASCL4Q6XD76 172 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 C18orf65Q6ZTR6 163 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 LYPD6Q86Y78 171 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 PDPNQ86YL7 162 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 Q8N402 240 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 FAM71E2Q8N5Q1 922 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 ZNF491Q8N8L2 437 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 POC5Q8NA72 575 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 LFNGQ8NES3 379 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 OR5T1Q8NG75 326 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 VSTM2AQ8TAG5 236 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 RGP1Q92546 391 aaPredicted RBP2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 PHYHIPQ92561 330 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 GGHQ92820 318 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 USMG5Q96IX5 58 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 ADTRPQ96IZ2 230 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 HARBI1Q96MB7 349 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 SPIN2AQ99865 258 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 SPIN2BQ9BPZ2 258 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 HSPB9Q9BQS6 159 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 FAAP24Q9BTP7 215 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 C6orf62Q9GZU0 229 aaPredicted RBP2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 SLC35D1Q9NTN3 355 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 CNOT2Q9NZN8 540 aaKnown RBP2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 THYN1Q9P016 225 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 PEF1Q9UBV8 284 aaKnown RBP2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 ZNF580Q9UK33 172 aa2.91□□□□□ -1.94
HMGN1P11-201ENST00000508668 IGHV4OR15-8A0A075B7B6 117 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 A0A087WW49 117 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 IGHV7-81A0A0B4J1V7 117 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 TRBV5-5A0A0J9YX44 114 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 A0A1W2PP11 408 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 ZNF320A2RRD8 509 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 ZNF736B4DX44 427 aaPredicted RBP2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 TRDCB7Z8K6 153 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 SLC31A2O15432 143 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 SCGB2A1O75556 95 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 SCGNO76038 276 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 SLC22A5O76082 557 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 CTXN2P0C2S0 81 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 CGB3P0DN86 165 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 CGB7P0DN87 165 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 CRHBPP24387 322 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 CALRP27797 417 aaKnown RBP2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 VEGFCP49767 419 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 ZNF137PP52743 207 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 CD81P60033 236 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 RPS27AP62979 156 aaKnown RBP2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 HLA-DRB3P79483 266 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 RUNX1Q01196 453 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 GNMTQ14749 295 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 PSG5Q15238 335 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 P2RY14Q15391 338 aa2.9□□□□□ -1.95
HMGN1P11-201ENST00000508668 SPHARQ15513 63 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms