RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CITED2Q99967 270 aaPredicted RBP11.81□□□□□ -0.52
RNF4-210ENST00000508235 LINC00527Q9UJ94 153 aa11.81□□□□□ -0.52
RNF4-210ENST00000508235 TSSC4Q9Y5U2 329 aaPredicted RBP11.81□□□□□ -0.52
RNF4-210ENST00000508235 TRAV41A0A0B4J266 112 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
RNF4-210ENST00000508235 FCN1O00602 326 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 ACTL6BO94805 426 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 CNIH1O95406 144 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 HPRT1P00492 218 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 RLN1P04808 185 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 FAUP35544 74 aaKnown RBP11.8□□□□□ -0.52
RNF4-210ENST00000508235 CRIP2P52943 208 aaPredicted RBP11.8□□□□□ -0.52
RNF4-210ENST00000508235 FXYD3Q14802 87 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 SCGB2B2Q4G0G5 96 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 OR4D10Q8NGI6 311 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 ZFAND1Q8TCF1 268 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 DEDD2Q8WXF8 326 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 ARPC1AQ92747 370 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 GPHA2Q96T91 129 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 PRRT1Q99946 306 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 PLEKHA2Q9HB19 425 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 BATF3Q9NR55 127 aa11.8□□□□□ -0.52
RNF4-210ENST00000508235 FAM212BQ9NTI7 297 aaPredicted RBP11.8□□□□□ -0.52
RNF4-210ENST00000508235 A6NHS1 94 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 OR2A4O95047 310 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 ELANEP08246 267 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 SAA1P0DJI8 122 aaPredicted RBP11.79□□□□□ -0.52
RNF4-210ENST00000508235 F2RP25116 425 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 BRWD1-AS2P59051 145 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 TAS2R31P59538 309 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 FOXE3Q13461 319 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 ZNF79Q15937 498 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 PHLDA2Q53GA4 152 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 CXorf66Q5JRM2 361 aaPredicted RBP11.79□□□□□ -0.52
RNF4-210ENST00000508235 KHDC1LQ5JSQ8 128 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 TOMM5Q8N4H5 51 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 OR4F17Q8NGA8 305 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 OR4C16Q8NGL9 310 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 OR4A5Q8NH83 315 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 RHOVQ96L33 236 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 OR2A7Q96R45 310 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 OR4F4Q96R69 305 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 SLC2A9Q9NRM0 540 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 TPSG1Q9NRR2 321 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 ZFP57Q9NU63 452 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 COMMD9Q9P000 198 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 SCP2D1Q9UJQ7 156 aa11.79□□□□□ -0.52
RNF4-210ENST00000508235 RAMP3O60896 148 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 IGHG4P01861 327 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 ZNF735P0CB33 412 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 NQO2P16083 231 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 SLC6A1P30531 599 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 PPP5CP53041 499 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 ERVK-16P61578 105 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 RND3P61587 244 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 GNB1P62873 340 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 ZNF45Q02386 682 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 CFHR3Q02985 330 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 SURF2Q15527 256 aaPredicted RBP11.78□□□□□ -0.52
RNF4-210ENST00000508235 PRSS8Q16651 343 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 AKIRIN2Q53H80 203 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 TCTEX1D4Q5JR98 221 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 TMEM65Q6PI78 240 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 C10orf99Q6UWK7 81 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 MMD2Q8IY49 270 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 GDPD1Q8N9F7 314 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 CCDC71LQ8N9Z2 235 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 TMEM68Q96MH6 324 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 SLC2A8Q9NY64 477 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 NUBP2Q9Y5Y2 271 aa11.78□□□□□ -0.52
RNF4-210ENST00000508235 KBTBD11O94819 623 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 CD40LGP29965 261 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 PPIFP30405 207 aaKnown RBP11.77□□□□□ -0.53
RNF4-210ENST00000508235 MAS1LP35410 378 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 INPP1P49441 399 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 PIGPP57054 158 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 NDPQ00604 133 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 TNXAQ16473 311 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 POU2AF1Q16633 256 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 ECSCRQ19T08 205 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 NSUN5P1Q3KNT7 163 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 UNQ5815/PRO19632Q6UWF5 114 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 IDO2Q6ZQW0 420 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 LINC00299Q6ZSB3 139 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 TBC1D26Q86UD7 250 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 PUSL1Q8N0Z8 303 aaKnown RBP11.77□□□□□ -0.53
RNF4-210ENST00000508235 MINDY2Q8NBR6 621 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 GRPEL2Q8TAA5 225 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 TRIM63Q969Q1 353 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 SCGB3A2Q96PL1 93 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 SRRQ9GZT4 340 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 MCUBQ9NWR8 336 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 BET1LQ9NYM9 111 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 COPZ2Q9P299 210 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 C14orf166Q9Y224 244 aaKnown RBP11.77□□□□□ -0.53
RNF4-210ENST00000508235 FOXA2Q9Y261 457 aaPredicted RBP11.77□□□□□ -0.53
RNF4-210ENST00000508235 WSB1Q9Y6I7 421 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 TENM1Q9UKZ4 2725 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 PLXNB1O43157 2135 aa11.77□□□□□ -0.53
RNF4-210ENST00000508235 G3V318 75 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms