RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 CST2P09228 141 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 SCGB1A1P11684 91 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 CCL2P13500 99 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 IGLL1P15814 213 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 SPNP16150 400 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 LOXP28300 417 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-205ENST00000505998 HTR1FP30939 366 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 MAS1LP35410 378 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 ARR3P36575 388 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 P2RY1P47900 373 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 CSNK1A1P48729 337 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 CCR6P51684 374 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 FGF8P55075 233 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-205ENST00000505998 CDC42P60953 191 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 FMODQ06828 376 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 ENDOGQ14249 297 aaKnown RBP3.91□□□□□ -1.78
NIPBL-205ENST00000505998 ARL6IP1Q15041 203 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 SLC9A3R2Q15599 337 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 BSXQ3C1V8 233 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 AKIRIN2Q53H80 203 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 TIMM23BQ5SRD1 257 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 ZNF684Q5T5D7 378 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 HAGHLQ6PII5 290 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-205ENST00000505998 DNM1P34Q6PK57 102 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 PLET1Q6UQ28 207 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 CASP12Q6UXS9 341 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 Q6ZSR3 168 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 AAED1Q7RTV5 226 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 OR2T4Q8NH00 348 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 RPS4Y2Q8TD47 263 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 COQ2Q96H96 371 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 ERMAPQ96PL5 475 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-205ENST00000505998 SLC38A2Q96QD8 506 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 NMNAT3Q96T66 252 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 TMEM208Q9BTX3 173 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 EMC6Q9BV81 110 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 REG4Q9BYZ8 158 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 NXF2Q9GZY0 626 aaKnown RBP3.91□□□□□ -1.78
NIPBL-205ENST00000505998 DCSTAMPQ9H295 470 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 DUSP21Q9H596 190 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 ZNF430Q9H8G1 570 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-205ENST00000505998 POLE4Q9NR33 117 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 SLC17A5Q9NRA2 495 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 GSKIPQ9P0R6 139 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 IER3IP1Q9Y5U9 82 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 SLC25A15Q9Y619 301 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 LHFPL6Q9Y693 200 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 ASH1LQ9NR48 2969 aaKnown RBP3.91□□□□□ -1.78
NIPBL-205ENST00000505998 DCHS2Q6V1P9 2916 aa3.91□□□□□ -1.78
NIPBL-205ENST00000505998 BAHCC1Q9P281 2608 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 OR6C6A6NF89 314 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 FABP12A6NFH5 140 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF726A6NNF4 738 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 C1orf196B1AJZ1 125 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 XKRYO14609 159 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 MRPS14O60783 128 aaKnown RBP3.9□□□□□ -1.79
NIPBL-205ENST00000505998 IGLV3-1P01715 115 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 HIST1H1BP16401 226 aaKnown RBP3.9□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF14P17017 642 aaPredicted RBP3.9□□□□□ -1.79
NIPBL-205ENST00000505998 ELK1P19419 428 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 ALOX5APP20292 161 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 VDAC1P21796 283 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 CRYGSP22914 178 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 CALCRP30988 508 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 ERVS71-1P61550 626 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 SLC35A2P78381 396 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 IL5RAQ01344 420 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 TGFBR3Q03167 851 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 C1DQ13901 141 aaKnown RBP3.9□□□□□ -1.79
NIPBL-205ENST00000505998 PSG3Q16557 428 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 CEACAM16Q2WEN9 425 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 C2orf83Q53S99 150 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 CLEC12AQ5QGZ9 265 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 TMEM236Q5W0B7 351 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF773Q6PK81 442 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 ZFP82Q8N141 532 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 WDR31Q8NA23 367 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 SDR9C7Q8NEX9 313 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 BPIFB6Q8NFQ5 453 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 OR10H4Q8NGA5 316 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 OR52E2Q8NGJ4 325 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 OR4K13Q8NH42 304 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 OTOSQ8NHW6 89 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 RNF133Q8WVZ7 376 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 PIGCQ92535 297 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 HAVCR1Q96D42 359 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 PELI1Q96FA3 418 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 TECTBQ96PL2 329 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 RBP7Q96R05 134 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 RNF2Q99496 336 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 C7orf50Q9BRJ6 194 aaKnown RBP3.9□□□□□ -1.79
NIPBL-205ENST00000505998 ULBP2Q9BZM5 246 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF436Q9C0F3 470 aaPredicted RBP3.9□□□□□ -1.79
NIPBL-205ENST00000505998 C1orf198Q9H425 327 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 NOX3Q9HBY0 568 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 ABCB9Q9NP78 766 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 FGF20Q9NP95 211 aaPredicted RBP3.9□□□□□ -1.79
NIPBL-205ENST00000505998 ONECUT1Q9UBC0 465 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 SMPXQ9UHP9 88 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 FBXL3Q9UKT7 428 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms