RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 OR5V1Q9UGF6 321 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 STOML2Q9UJZ1 356 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 FBXO5Q9UKT4 447 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 OR51B4Q9Y5P0 310 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 PXMP4Q9Y6I8 212 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 U3KQK5 164 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 SHPRHQ149N8 1683 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 TIAM1Q13009 1591 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 ABCC3O15438 1527 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 MAP3K1Q13233 1512 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 NKTRP30414 1462 aaKnown RBP2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 SSH2Q76I76 1423 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 KIDINS220Q9ULH0 1771 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 TMED7-TICAM2A0A0A6YYA0 188 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 IGHV1-69-2A0A0G2JMI3 117 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 PQLC2LA1A4F0 135 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 OR4C45A6NMZ5 311 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 LECT2O14960 151 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 OR5F1O95221 314 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 SERPINA1P01009 418 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 PPP1R2P41236 205 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 CAV1Q03135 178 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 FABP9Q0Z7S8 132 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 MOBPQ13875 183 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 GUK1Q16774 197 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 ACOT6Q3I5F7 207 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 ZNF660Q6AZW8 331 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 PPP1R2P3Q6NXS1 205 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 STX12Q86Y82 276 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 C1orf174Q8IYL3 243 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 LHFPL5Q8TAF8 219 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 DGCR14Q96DF8 476 aaKnown RBP2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 TRIM4Q9C037 500 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 ANAPC10Q9UM13 185 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 SAMD9Q5K651 1589 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 SAMD9LQ8IVG5 1584 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 PRDM15P57071 1507 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 TROQ12816 1431 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 ZC3H13Q5T200 1668 aaKnown RBP2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 OR6C6A6NF89 314 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 A8MWP6 167 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 K7EM74 188 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 HAND1O96004 215 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 IGHV3-30-3P0DP02 117 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 CCL1P22362 96 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 MAGEA12P43365 314 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 FLI1Q01543 452 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 MRPL51Q4U2R6 128 aaKnown RBP2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 SCXQ7RTU7 201 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 RNF182Q8N6D2 247 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 C12orf43Q96C57 262 aaKnown RBP2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 BTF3L4Q96K17 158 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 CCL13Q99616 98 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 ZNF2Q9BSG1 426 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 DUSP21Q9H596 190 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 DOK5Q9P104 306 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 ZNF443Q9Y2A4 671 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 ARL5AQ9Y689 179 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 PLXNC1O60486 1568 aa2.25□□□□□ -2.05
TRAPPC13-208ENST00000505553 SYCP2Q9BX26 1530 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 XIRP1Q702N8 1843 aaKnown RBP2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 BCL9LQ86UU0 1499 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 DCCP43146 1447 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 UNC13BO14795 1591 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 C15orf65H3BRN8 121 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 NOS1APO75052 506 aaPredicted RBP2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 INAFM2P0DMQ5 153 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 FOXA1P55317 472 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 VBP1P61758 197 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 RPS11P62280 158 aaKnown RBP eCLIP2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 HIST1H3AP68431 136 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 H3F3AP84243 136 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 DHRS2Q13268 280 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 TMEM136Q6ZRR5 245 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 C20orf196Q8IYI0 205 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 OR6V1Q8N148 313 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 DEDD2Q8WXF8 326 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 BORCS7Q96B45 105 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 GNPNAT1Q96EK6 184 aaPredicted RBP2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 CEP19Q96LK0 163 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 CMSS1Q9BQ75 279 aaKnown RBP2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 MND1Q9BWT6 205 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 ABCG5Q9H222 651 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 AK3Q9UIJ7 227 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 SNX12Q9UMY4 172 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 ANGPT4Q9Y264 503 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 SAMHD1Q9Y3Z3 626 aaKnown RBP2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 SVILO95425 2214 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 NCOA2Q15596 1464 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 PLEKHH2Q8IVE3 1493 aa2.24□□□□□ -2.05
TRAPPC13-208ENST00000505553 KDM5AP29375 1690 aaKnown RBP2.23□□□□□ -2.05
TRAPPC13-208ENST00000505553 RTEL1-TNFRSF6BF6WH68 1400 aa2.23□□□□□ -2.05
TRAPPC13-208ENST00000505553 SPATA31E1Q6ZUB1 1445 aa2.23□□□□□ -2.05
TRAPPC13-208ENST00000505553 SETD5Q9C0A6 1442 aa2.23□□□□□ -2.05
TRAPPC13-208ENST00000505553 PREX2Q70Z35 1606 aa2.23□□□□□ -2.05
TRAPPC13-208ENST00000505553 INO80Q9ULG1 1556 aaPredicted RBP2.23□□□□□ -2.05
TRAPPC13-208ENST00000505553 YLPM1P49750 1951 aaKnown RBP2.23□□□□□ -2.05
TRAPPC13-208ENST00000505553 IGKV1D-37A0A075B6S9 117 aa2.23□□□□□ -2.05
TRAPPC13-208ENST00000505553 A0A1B0GW54 56 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms