RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 TMEM242Q9NWH2 141 aa4.36□□□□□ -1.71
CLDND1-208ENST00000503004 IL36GQ9NZH8 169 aa4.36□□□□□ -1.71
CLDND1-208ENST00000503004 GNG13Q9P2W3 67 aa4.36□□□□□ -1.71
CLDND1-208ENST00000503004 SELENOKQ9Y6D0 94 aa4.36□□□□□ -1.71
CLDND1-208ENST00000503004 IGKV1-6A0A0C4DH72 117 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 C3orf85A0A1B0GTC6 90 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 NKX2-6A6NCS4 301 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 B4DEV8 164 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 RHBDL1O75783 438 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 SEC11BP0C7V7 166 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 CD59P13987 128 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 RUNX1Q01196 453 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 RTP5Q14D33 572 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 ACTL10Q5JWF8 245 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 TMEM211Q6ICI0 200 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 TBC1D26Q86UD7 250 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 ZDHHC23Q8IYP9 409 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 GAPTQ8N292 157 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 TMEM217Q8N7C4 229 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 Q8N976 141 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 UBALD1Q8TB05 177 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 C18orf12Q96KH6 178 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 BET1LQ9NYM9 111 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 UQCR10Q9UDW1 63 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 USF3Q68DE3 2245 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 GAGE12BA1L429 117 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 CD300LBA8K4G0 201 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 MPPED1O15442 326 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 ST8SIA3O43173 380 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 RBFOX2O43251 390 aaKnown RBP eCLIP4.35□□□□□ -1.71
CLDND1-208ENST00000503004 GPR137BO60478 399 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 TNFSF15O95150 251 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 SCGB1A1P11684 91 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 AZU1P20160 251 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 PLA2G5P39877 138 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 MEOX1P50221 254 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 FGF12P61328 243 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 HERV-K104P63124 156 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 HOXA4Q00056 320 aaPredicted RBP4.35□□□□□ -1.71
CLDND1-208ENST00000503004 ADIRFQ15847 76 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 SRSF7Q16629 238 aaKnown RBP eCLIP4.35□□□□□ -1.71
CLDND1-208ENST00000503004 BSXQ3C1V8 233 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 CEACAM21Q3KPI0 293 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 SPATA45Q537H7 98 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 RNFT1Q5M7Z0 435 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 MBNL2Q5VZF2 373 aaKnown RBP4.35□□□□□ -1.71
CLDND1-208ENST00000503004 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.35□□□□□ -1.71
CLDND1-208ENST00000503004 LGI3Q8N145 548 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 CISD2Q8N5K1 135 aaKnown RBP4.35□□□□□ -1.71
CLDND1-208ENST00000503004 LFNGQ8NES3 379 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 OR1K1Q8NGR3 316 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 APOBEC3DQ96AK3 386 aaPredicted RBP4.35□□□□□ -1.71
CLDND1-208ENST00000503004 LYRM2Q9NU23 88 aaPredicted RBP4.35□□□□□ -1.71
CLDND1-208ENST00000503004 ABI3Q9P2A4 366 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 NSG2Q9Y328 171 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 STRAPQ9Y3F4 350 aaKnown RBP4.35□□□□□ -1.71
CLDND1-208ENST00000503004 WIPI2Q9Y4P8 454 aa4.35□□□□□ -1.71
CLDND1-208ENST00000503004 ROS1P08922 2347 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 SPAARA0A1B0GVQ0 90 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 IGLC7A0M8Q6 106 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 FAM24AA6NFZ4 105 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 OR2T8A6NH00 312 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 RNF212BA8MTL3 300 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 TRAPPC2LH3BP13 241 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 TAX1BP3O14907 124 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 RAB29O14966 203 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 WISP2O76076 250 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 NAPSAO96009 420 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 MT-CO3P00414 261 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 SP1P08047 785 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 SP9P0CG40 484 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 CA6P23280 308 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 GCH1P30793 250 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 CEBPDP49716 269 aaPredicted RBP4.34□□□□□ -1.71
CLDND1-208ENST00000503004 CNN1P51911 297 aaKnown RBP4.34□□□□□ -1.71
CLDND1-208ENST00000503004 PMP22Q01453 160 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 KIAA1644Q3SXP7 199 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 NRN1LQ496H8 165 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 CXorf66Q5JRM2 361 aaPredicted RBP4.34□□□□□ -1.71
CLDND1-208ENST00000503004 HES3Q5TGS1 186 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 FAM90A2PQ658T7 463 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 AMMECR1LQ6DCA0 310 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 LRTM2Q8N967 370 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 FER1L6-AS1Q8NA97 138 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 IL1F10Q8WWZ1 152 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 ZC2HC1AQ96GY0 325 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 FER1L6-AS2Q96M78 137 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 LINC00470Q9BZP3 86 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 Q9N2K0 584 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 CCL28Q9NRJ3 127 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 HIF1ANQ9NWT6 349 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 UBE2J1Q9Y385 318 aaPredicted RBP4.34□□□□□ -1.71
CLDND1-208ENST00000503004 ANKRD11Q6UB99 2663 aaPredicted RBP4.34□□□□□ -1.71
CLDND1-208ENST00000503004 BSNQ9UPA5 3926 aa4.34□□□□□ -1.71
CLDND1-208ENST00000503004 GRIFINA4D1Z8 144 aa4.34□□□□□ -1.72
CLDND1-208ENST00000503004 SLC22A20A6NK97 555 aa4.34□□□□□ -1.72
CLDND1-208ENST00000503004 C21orf140B9A014 251 aa4.34□□□□□ -1.72
CLDND1-208ENST00000503004 H7BYZ3 331 aa4.34□□□□□ -1.72
CLDND1-208ENST00000503004 CDIPTO14735 213 aa4.34□□□□□ -1.72
CLDND1-208ENST00000503004 SSSCA1O60232 199 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms