RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ADTRPQ96IZ2 230 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 PHB2Q99623 299 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 B9D2Q9BPU9 175 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 DCUN1D5Q9BTE7 237 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 AUNIPQ9H7T9 357 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 ZNF430Q9H8G1 570 aaPredicted RBP8.16□□□□□ -1.1
NELFE-213ENST00000494956 CCL28Q9NRJ3 127 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 COA4Q9NYJ1 87 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 TAS2R8Q9NYW2 309 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 ZNF256Q9Y2P7 627 aaPredicted RBP8.16□□□□□ -1.1
NELFE-213ENST00000494956 ETV7Q9Y603 341 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 SORL1Q92673 2214 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 HMX3A6NHT5 357 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 E7EUB6 86 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 SCGNO76038 276 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 CTXN2P0C2S0 81 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 MYOD1P15172 320 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 SPNP16150 400 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 FCGR2CP31995 323 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 VAX1Q5SQQ9 334 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 ACSM6Q6P461 480 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 SSX9Q7RTT3 188 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 HOGA1Q86XE5 327 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 MFSD4AQ8N468 514 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 TEX45Q8NA69 505 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 SECTM1Q8WVN6 248 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 TCTEX1D2Q8WW35 142 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 SNAPC3Q92966 411 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 SLA2Q9H6Q3 261 aa8.15□□□□□ -1.1
NELFE-213ENST00000494956 C13orf42A0A1B0GVH6 325 aa8.14□□□□□ -1.11
NELFE-213ENST00000494956 A0A1B0GW64 132 aa8.14□□□□□ -1.11
NELFE-213ENST00000494956 CD40LGP29965 261 aa8.14□□□□□ -1.11
NELFE-213ENST00000494956 SCAND1P57086 179 aa8.14□□□□□ -1.11
NELFE-213ENST00000494956 FXYD4P59646 89 aa8.14□□□□□ -1.11
NELFE-213ENST00000494956 ARPC4P59998 168 aa8.14□□□□□ -1.11
NELFE-213ENST00000494956 NCS1P62166 190 aa8.14□□□□□ -1.11
NELFE-213ENST00000494956 ZNF45Q02386 682 aa8.14□□□□□ -1.11
NELFE-213ENST00000494956 DYRK1AQ13627 763 aa8.14□□□□□ -1.11
NELFE-213ENST00000494956 CDK10Q15131 360 aa8.14□□□□□ -1.11
NELFE-213ENST00000494956 ADAD2Q8NCV1 583 aaKnown RBP8.14□□□□□ -1.11
NELFE-213ENST00000494956 OR13F1Q8NGS4 319 aa8.14□□□□□ -1.11
NELFE-213ENST00000494956 OSR1Q8TAX0 266 aaPredicted RBP8.14□□□□□ -1.11
NELFE-213ENST00000494956 TINAGL1Q9GZM7 467 aaPredicted RBP8.14□□□□□ -1.11
NELFE-213ENST00000494956 DIABLOQ9NR28 239 aa8.14□□□□□ -1.11
NELFE-213ENST00000494956 A0A087WXM4 84 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 MPPED1O15442 326 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 TNFAIP8O95379 198 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 PPYP01298 95 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 RFX2P48378 723 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 SMCPP49901 116 aaPredicted RBP8.13□□□□□ -1.11
NELFE-213ENST00000494956 VBP1P61758 197 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 OVCH2Q7RTZ1 564 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 ZNF429Q86V71 674 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 TMEM17Q86X19 198 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 SAMD12Q8N8I0 201 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 HSD17B10Q99714 261 aaKnown RBP8.13□□□□□ -1.11
NELFE-213ENST00000494956 RSRP1Q9BUV0 290 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 FUNDC2Q9BWH2 189 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 SLC5A7Q9GZV3 580 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 NAA50Q9GZZ1 169 aaKnown RBP8.13□□□□□ -1.11
NELFE-213ENST00000494956 AKIP1Q9NQ31 210 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 PRELID3BQ9Y3B1 194 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 S4R3C0 116 aa8.13□□□□□ -1.11
NELFE-213ENST00000494956 TRIM64CA6NLI5 447 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 TEX22C9J3V5 150 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 H3BUA1 57 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 SULT1C2O00338 296 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 XRCC3O43542 346 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 PMP2P02689 132 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 EIF4EP06730 217 aaKnown RBP8.12□□□□□ -1.11
NELFE-213ENST00000494956 IL6RP08887 468 aaPredicted RBP8.12□□□□□ -1.11
NELFE-213ENST00000494956 OR9G9P0C7N8 305 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 GP9P14770 177 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 RPA2P15927 270 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 INSL3P51460 131 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 SYNJ2BPP57105 145 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 TAS2R20P59543 309 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 TIMM50Q3ZCQ8 353 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 UBE2NLQ5JXB2 153 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 ZNF818PQ6ZRF7 136 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 PUSL1Q8N0Z8 303 aaKnown RBP8.12□□□□□ -1.11
NELFE-213ENST00000494956 FYTTD1Q96QD9 318 aaKnown RBP8.12□□□□□ -1.11
NELFE-213ENST00000494956 ZFAND3Q9H8U3 227 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 RANGRFQ9HD47 186 aaPredicted RBP8.12□□□□□ -1.11
NELFE-213ENST00000494956 IFT46Q9NQC8 304 aa8.12□□□□□ -1.11
NELFE-213ENST00000494956 ZMAT5Q9UDW3 170 aaKnown RBP8.12□□□□□ -1.11
NELFE-213ENST00000494956 MRPS7Q9Y2R9 242 aaKnown RBP8.12□□□□□ -1.11
NELFE-213ENST00000494956 A0A0A6YYH2 397 aa8.11□□□□□ -1.11
NELFE-213ENST00000494956 TRAV3A0A0B4J244 114 aa8.11□□□□□ -1.11
NELFE-213ENST00000494956 A0A0G2JLM5 398 aa8.11□□□□□ -1.11
NELFE-213ENST00000494956 A6NJ64 397 aa8.11□□□□□ -1.11
NELFE-213ENST00000494956 CGB1A6NKQ9 187 aa8.11□□□□□ -1.11
NELFE-213ENST00000494956 OR2J3O76001 311 aa8.11□□□□□ -1.11
NELFE-213ENST00000494956 SLC22A5O76082 557 aa8.11□□□□□ -1.11
NELFE-213ENST00000494956 ACTL6BO94805 426 aa8.11□□□□□ -1.11
NELFE-213ENST00000494956 KBTBD11O94819 623 aa8.11□□□□□ -1.11
NELFE-213ENST00000494956 OR2A4O95047 310 aa8.11□□□□□ -1.11
NELFE-213ENST00000494956 IGHV3-23P01764 117 aa8.11□□□□□ -1.11
NELFE-213ENST00000494956 REG1AP05451 166 aa8.11□□□□□ -1.11
NELFE-213ENST00000494956 AREGP15514 252 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms