RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SYNE1Q8NF91 8797 aaKnown RBP-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 RP1P56715 2156 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 A0A1B0GW15 77 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 OR6C6A6NF89 314 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 C9JCJ5 164 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 CLDN25C9JDP6 229 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 LDOC1O95751 146 aaPredicted RBP-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 MSMBP08118 114 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 LIMS3P0CW19 117 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 LIMS4P0CW20 117 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 SFTPCP11686 197 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 MSNP26038 577 aaKnown RBP-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 ADORA1P30542 326 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 H2BFSP57053 126 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 TMEM33P57088 247 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 OR10A3P58181 314 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 RAB8AP61006 207 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 TMEM267Q0VDI3 215 aaPredicted RBP-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 RAB31Q13636 194 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 C18orf21Q32NC0 220 aaPredicted RBP-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 MESTQ5EB52 335 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 LCN8Q6JVE9 175 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 ATP5L2Q7Z4Y8 100 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 C1orf174Q8IYL3 243 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 ST13P4Q8IZP2 240 aaPredicted RBP-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 C17orf78Q8N4C9 275 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 Q8WTZ3 238 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 AQP3Q92482 292 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 RORBQ92753 470 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 RAB1BQ9H0U4 201 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 XAGE1AQ9HD64 81 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 RBM7Q9Y580 266 aaKnown RBP-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 CHD5Q8TDI0 1954 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 GREB1Q4ZG55 1949 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 CNTRLQ7Z7A1 2325 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 COL7A1Q02388 2944 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 MEGF8Q7Z7M0 2845 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 FUOMA2VDF0 154 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 C21orf140B9A014 251 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 M0R381 172 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 SYNGR1O43759 233 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 HMMRO75330 724 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 CST4P01036 141 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 PPBPP02775 128 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 HLA-DQB2P05538 268 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 TPM2P07951 284 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 METTL15P1P0C7V9 234 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 HAAOP46952 286 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 CDK9P50750 372 aaKnown RBP-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 RUNX1Q01196 453 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 OR4D1Q15615 310 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 OR52E4Q8NGH9 312 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 ASB13Q8WXK3 278 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 ACOT12Q8WYK0 555 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 OBSCN-AS1Q96MR7 158 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 TMEM56Q96MV1 263 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 FAM210AQ96ND0 272 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 AMELYQ99218 206 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 TMEM208Q9BTX3 173 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 NIT2Q9NQR4 276 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 ZNHIT6Q9NWK9 470 aaKnown RBP-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 NAT8Q9UHE5 227 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 ZFP30Q9Y2G7 519 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 RBMX2Q9Y388 322 aaKnown RBP-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 THSD7AQ9UPZ6 1657 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 ABCC12Q96J65 1359 aa-0.06□□□□□ -2.42
CCDC93-209ENST00000488908 TRBV10-2A0A0K0K1G8 114 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 IRGMA1A4Y4 181 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 TMEM212A6NML5 194 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 C19orf84I3L1E1 186 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 SGCEO43556 437 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 OR2T1O43869 369 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 ASS1P00966 412 aaKnown RBP-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 CSTAP01040 98 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 PMP2P02689 132 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 DEFA4P12838 97 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 NFYAP23511 347 aaPredicted RBP-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 SLCO1A2P46721 670 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 PSMD7P51665 324 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 FXYD2P54710 66 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 DLX6P56179 175 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 DMTNQ08495 405 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 GDF5OSQ5U4N7 250 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 FAM27BQ5VT28 67 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 PDPK2PQ6A1A2 396 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 XKRXQ6PP77 449 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 PACRGLQ8N7B6 248 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 LRRC20Q8TCA0 184 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 RNASE6Q93091 150 aaKnown RBP-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 LRRC39Q96DD0 335 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 PARVAQ9NVD7 372 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 PLAC8Q9NZF1 115 aa-0.07□□□□□ -2.42
CCDC93-209ENST00000488908 MAP3K19Q56UN5 1328 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 METTL15A6NJ78 407 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 SULT1C2O00338 296 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 SLC22A1O15245 554 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 NEMFO60524 1076 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 FADS2O95864 444 aaKnown RBP-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 TFPTP0C1Z6 253 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 LINC00614P0C842 121 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms