RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 THBS3P49746 956 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 RAB13P51153 203 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 CEBPGP53567 150 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 PTTG1IPP53801 180 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 SPCS3P61009 180 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 RAB11AP62491 216 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 PNRC1Q12796 327 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 HAGHQ16775 308 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 LRRC75BQ2VPJ9 315 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 HFEQ30201 348 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 RNF212Q495C1 297 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 OR2B11Q5JQS5 317 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF506Q5JVG8 444 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 OR8G2PQ6IF36 304 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 Q6ZR03 302 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 SLC35E3Q7Z769 313 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 C11orf53Q8IXP5 236 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 C1orf87Q8N0U7 546 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 CD177Q8N6Q3 437 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF525Q8N782 197 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 NUP37Q8NFH4 326 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 OR13A1Q8NGR1 328 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 UBALD1Q8TB05 177 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 R3HDM4Q96D70 268 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 RAX2Q96IS3 184 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 YPEL2Q96QA6 119 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 OR2V2Q96R30 315 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 P2RX4Q99571 388 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF251Q9BRH9 671 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 ACTR3CQ9C0K3 210 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 SAV1Q9H4B6 383 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF665Q9H7R5 613 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 MANBALQ9NQG1 85 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 SLC39A9Q9NUM3 307 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 CISD1Q9NZ45 108 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 GNG13Q9P2W3 67 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 DKK4Q9UBT3 224 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 IL19Q9UHD0 177 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 PUS1Q9Y606 427 aaKnown RBP eCLIP4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 KNTC1P50748 2209 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 FRYLO94915 3013 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 A0A087WWC5 75 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 IGHV3-43A0A0B4J1X8 118 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 A0A0G2JRQ6 117 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 LOC102723971A0A1B0GUV8 181 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 hADV38S2A0JD32 116 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 GAGE12BA1L429 117 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 MAP1LC3B2A6NCE7 125 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 GAGE12HA6NDE8 117 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 CXorf65A6NEN9 183 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF729A6NN14 1252 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 MARCH11A6NNE9 402 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 F2RL2O00254 374 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 SIGLEC5O15389 551 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 CYB5BO43169 146 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 FCGR3BO75015 233 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 S1PR2O95136 353 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 OR2C1O95371 312 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 TMEM50AO95807 157 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 HRASP01112 189 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 IFNA10P01566 189 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 IGKV1-39P01597 117 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 IGLV2-14P01704 120 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 IGKV1D-39P04432 117 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 S100A9P06702 114 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 IGHV3-43DP0DP04 118 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 BCL2P10415 239 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 FOLR2P14207 255 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 NQO2P16083 231 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 FGF7P21781 194 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 BMP5P22003 454 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 CEACAM8P31997 349 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 SSTR5P35346 364 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 HOXA1P49639 335 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 FHITP49789 147 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 AKR1D1P51857 326 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 PAX9P55771 341 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 OR2B8PP59922 312 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 RUNX1Q01196 453 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 RAB31Q13636 194 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 LTC4SQ16873 150 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 RTL8BQ17RB0 113 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 ACOT6Q3I5F7 207 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF585BQ52M93 769 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 BTNL3Q6UXE8 466 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 TMEM14EPQ6UXP3 125 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 GFRALQ6UXV0 394 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 C5orf24Q7Z6I8 188 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF429Q86V71 674 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 RXFP4Q8TDU9 374 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 TMEM171Q8WVE6 324 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 ITLN1Q8WWA0 313 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 TAF15Q92804 592 aaKnown RBP eCLIP4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 CORO2AQ92828 525 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 LHX4Q969G2 390 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 TVP23CQ96ET8 276 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 TCEAL7Q9BRU2 100 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 ABHD14AQ9BUJ0 271 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 GGACTQ9BVM4 153 aa4.87□□□□□ -1.63
ATPAF1-204ENST00000474020 MRPL37Q9BZE1 423 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms