RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 IGLV1-47P01700 117 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 ZFP36P26651 326 aaKnown RBP14.74□□□□□ -0.05
SMC4-211ENST00000469858 BAXQ07812 192 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 OR4A47Q6IF82 309 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 STX12Q86Y82 276 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 OR5AN1Q8NGI8 311 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 OR5C1Q8NGR4 320 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 ZDHHC16Q969W1 377 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 SMIM8Q96KF7 97 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 FAM208BQ5VWN6 2430 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 BORCS7-ASMTA0A0B4J1R7 106 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 DYNLT3P51808 116 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 RELBQ01201 579 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 SPANXN5Q5MJ07 72 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 PNKDQ8N490 385 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 CLDND2Q8NHS1 167 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 UTP20O75691 2785 aaKnown RBP14.73□□□□□ -0.05
SMC4-211ENST00000469858 CEBPZOSA8MTT3 80 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 M0R1W7 72 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 SHOXO15266 292 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 IFNA17P01571 189 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 RRASP10301 218 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 ARHGDIBP52566 201 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 TAS2R30P59541 319 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 LCN2P80188 198 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 UBAC2Q8NBM4 344 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 BEND2Q8NDZ0 799 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 DTD1Q8TEA8 209 aa14.73□□□□□ -0.05
SMC4-211ENST00000469858 LINC00862A6NCI5 91 aa14.72□□□□□ -0.05
SMC4-211ENST00000469858 METTL15P1P0C7V9 234 aa14.72□□□□□ -0.05
SMC4-211ENST00000469858 SULT1A1P50225 295 aa14.72□□□□□ -0.05
SMC4-211ENST00000469858 TAGLNQ01995 201 aaKnown RBP14.72□□□□□ -0.05
SMC4-211ENST00000469858 HARBI1Q96MB7 349 aa14.72□□□□□ -0.05
SMC4-211ENST00000469858 SLC25A32Q9H2D1 315 aa14.72□□□□□ -0.05
SMC4-211ENST00000469858 SRRM4A7MD48 611 aaKnown RBP14.71□□□□□ -0.05
SMC4-211ENST00000469858 BUB1B-PAK6H3BSN5 160 aa14.71□□□□□ -0.05
SMC4-211ENST00000469858 FBXO24O75426 580 aa14.71□□□□□ -0.05
SMC4-211ENST00000469858 ATP5J2P56134 94 aa14.71□□□□□ -0.05
SMC4-211ENST00000469858 POU2AF1Q16633 256 aa14.71□□□□□ -0.05
SMC4-211ENST00000469858 PDZD9Q8IXQ8 264 aa14.71□□□□□ -0.05
SMC4-211ENST00000469858 OR4P4Q8NGL7 312 aa14.71□□□□□ -0.05
SMC4-211ENST00000469858 NRGNQ92686 78 aa14.71□□□□□ -0.05
SMC4-211ENST00000469858 CXorf58Q96LI9 332 aa14.71□□□□□ -0.05
SMC4-211ENST00000469858 NUP50Q9UKX7 468 aa14.71□□□□□ -0.05
SMC4-211ENST00000469858 ENSAO43768 121 aaKnown RBP14.71□□□□□ -0.06
SMC4-211ENST00000469858 LMO4P61968 165 aa14.71□□□□□ -0.06
SMC4-211ENST00000469858 AARDQ4LEZ3 155 aa14.71□□□□□ -0.06
SMC4-211ENST00000469858 PDPNQ86YL7 162 aa14.71□□□□□ -0.06
SMC4-211ENST00000469858 OR1S2Q8NGQ3 325 aa14.71□□□□□ -0.06
SMC4-211ENST00000469858 OSR1Q8TAX0 266 aaPredicted RBP14.71□□□□□ -0.06
SMC4-211ENST00000469858 FAM168AQ92567 244 aa14.71□□□□□ -0.06
SMC4-211ENST00000469858 LHX4Q969G2 390 aa14.71□□□□□ -0.06
SMC4-211ENST00000469858 FLYWCH2Q96CP2 140 aaKnown RBP14.71□□□□□ -0.06
SMC4-211ENST00000469858 PCGF1Q9BSM1 259 aa14.71□□□□□ -0.06
SMC4-211ENST00000469858 WASHC3Q9Y3C0 194 aa14.71□□□□□ -0.06
SMC4-211ENST00000469858 KMT2BQ9UMN6 2715 aaPredicted RBP14.7□□□□□ -0.06
SMC4-211ENST00000469858 C15orf61A6NNL5 157 aa14.7□□□□□ -0.06
SMC4-211ENST00000469858 KLRD1Q13241 179 aa14.7□□□□□ -0.06
SMC4-211ENST00000469858 ZNF266Q14584 549 aa14.7□□□□□ -0.06
SMC4-211ENST00000469858 CIB3Q96Q77 187 aaPredicted RBP14.7□□□□□ -0.06
SMC4-211ENST00000469858 CITED4Q96RK1 184 aa14.7□□□□□ -0.06
SMC4-211ENST00000469858 PIMREGQ9BSJ6 248 aa14.7□□□□□ -0.06
SMC4-211ENST00000469858 AMMECR1Q9Y4X0 333 aaPredicted RBP14.7□□□□□ -0.06
SMC4-211ENST00000469858 LRRK2Q5S007 2527 aa14.7□□□□□ -0.06
SMC4-211ENST00000469858 IGHV3-72A0A0B4J1Y9 119 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 ARG1P05089 322 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 SAA1P0DJI8 122 aaPredicted RBP14.69□□□□□ -0.06
SMC4-211ENST00000469858 SPCS3P61009 180 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 TMEM177Q53S58 311 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 EIF5AL1Q6IS14 154 aaKnown RBP14.69□□□□□ -0.06
SMC4-211ENST00000469858 HSD17B11Q8NBQ5 300 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 OR4C13Q8NGP0 309 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 PERPQ96FX8 193 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 TACC2O95359 2948 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 PRTN3P24158 256 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 RAB13P51153 203 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 ZNF429Q86V71 674 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 COMMD7Q86VX2 200 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 OR52E5Q8NH55 327 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 RPEQ96AT9 228 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 OR4C12Q96R67 309 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 AIFM2Q9BRQ8 373 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 ARV1Q9H2C2 271 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 CRYBG3Q68DQ2 2970 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 WNK2Q9Y3S1 2297 aa14.69□□□□□ -0.06
SMC4-211ENST00000469858 A8MXK9 166 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 MC5RP33032 325 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 RPS16P62249 146 aaKnown RBP14.68□□□□□ -0.06
SMC4-211ENST00000469858 ARL16Q0P5N6 197 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 CLEC2AQ6UVW9 174 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 TMEM14EPQ6UXP3 125 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 HAPLN4Q86UW8 402 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 KIR3DL3Q8N743 410 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 ATP5SQ99766 215 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 GINS3Q9BRX5 216 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 BARX1Q9HBU1 254 aaPredicted RBP14.68□□□□□ -0.06
SMC4-211ENST00000469858 MMP26Q9NRE1 261 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 TMEM14BQ9NUH8 114 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 TCF19Q9Y242 345 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 FOXA2Q9Y261 457 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms