RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 RRASP10301 218 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 S100GP29377 79 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 IER3P46695 156 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 LGALS7P47929 136 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 HNF4GQ14541 408 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 AANATQ16613 207 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 POU2AF1Q16633 256 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 LIN54Q6MZP7 749 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 CLEC9AQ6UXN8 241 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 Q6YL49 198 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 IL17RELQ6ZVW7 336 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 LGI3Q8N145 548 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 NPBQ8NG41 125 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 CASTOR1Q8WTX7 329 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 TCTEX1D2Q8WW35 142 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 C22orf15Q8WYQ4 148 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 IL22RA2Q969J5 263 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 GPR146Q96CH1 333 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 FLYWCH2Q96CP2 140 aaKnown RBP4.76□□□□□ -1.65
USP39-213ENST00000467885 OR2A7Q96R45 310 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 SSX3Q99909 188 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 ARPC5LQ9BPX5 153 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 MS4A7Q9GZW8 240 aaPredicted RBP4.76□□□□□ -1.65
USP39-213ENST00000467885 GPN1Q9HCN4 374 aaPredicted RBP4.76□□□□□ -1.65
USP39-213ENST00000467885 SLC35D1Q9NTN3 355 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 ACANP16112 2415 aa4.76□□□□□ -1.65
USP39-213ENST00000467885 CR1P17927 2039 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 ABCA2Q9BZC7 2435 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 ABCA1O95477 2261 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 MXRA5Q9NR99 2828 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 TRAV3A0A0B4J244 114 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 MDFIC2A0A1B0GVS7 189 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 A6NDX4 124 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 MPTX1A8MV57 137 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 H7C2Y5 167 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 TXNL1O43396 289 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 PITX3O75364 302 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 ADAP1O75689 374 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 S1PR2O95136 353 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 CRYZL1O95825 349 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 MOSP00540 346 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 HLA-AP01891 365 aaKnown RBP4.75□□□□□ -1.65
USP39-213ENST00000467885 AMY1AP04745 511 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 SERPINE2P07093 398 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 SNRNP70P08621 437 aaKnown RBP4.75□□□□□ -1.65
USP39-213ENST00000467885 FAM106CPP0CH98 169 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 SULT1A3P0DMM9 295 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 SULT1A4P0DMN0 295 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 RPA2P15927 270 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 CXCL3P19876 107 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 CNTFRP26992 372 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 BRS3P32247 399 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 G6PCP35575 357 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 KIR2DS2P43631 304 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 RPS16P62249 146 aaKnown RBP4.75□□□□□ -1.65
USP39-213ENST00000467885 SRSF4Q08170 494 aaKnown RBP4.75□□□□□ -1.65
USP39-213ENST00000467885 CATR1Q13166 79 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 CBX3Q13185 183 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 PSG5Q15238 335 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 FCN2Q15485 313 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 IZUMO4Q1ZYL8 232 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 NMSQ5H8A3 153 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 OR2B11Q5JQS5 317 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 TMEM268Q5VZI3 342 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 GGNBP1Q5YKI7 109 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 DHRS7BQ6IAN0 325 aaPredicted RBP4.75□□□□□ -1.65
USP39-213ENST00000467885 CCDC144NLQ6NUI1 221 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 C11orf88Q6PI97 169 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 Q71RC1 249 aaPredicted RBP4.75□□□□□ -1.65
USP39-213ENST00000467885 PDPNQ86YL7 162 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 ZNF695Q8IW36 515 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 VKORC1L1Q8N0U8 176 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 PUSL1Q8N0Z8 303 aaKnown RBP4.75□□□□□ -1.65
USP39-213ENST00000467885 SLC35G3Q8N808 338 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 TEX45Q8NA69 505 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 UXS1Q8NBZ7 420 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 OR11H7Q8NGC8 314 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 OR4C13Q8NGP0 309 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 OR2T10Q8NGZ9 312 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 OSR1Q8TAX0 266 aaPredicted RBP4.75□□□□□ -1.65
USP39-213ENST00000467885 RBPMSQ93062 196 aaKnown RBP4.75□□□□□ -1.65
USP39-213ENST00000467885 LSM10Q969L4 123 aaKnown RBP4.75□□□□□ -1.65
USP39-213ENST00000467885 OR10C1Q96KK4 312 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 RHOVQ96L33 236 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 RAB18Q9NP72 206 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 WASHC3Q9Y3C0 194 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 FAM96BQ9Y3D0 163 aa4.75□□□□□ -1.65
USP39-213ENST00000467885 E7EUB6 86 aa4.74□□□□□ -1.65
USP39-213ENST00000467885 UPK2O00526 184 aa4.74□□□□□ -1.65
USP39-213ENST00000467885 CREBL2O60519 120 aaPredicted RBP4.74□□□□□ -1.65
USP39-213ENST00000467885 SIX6O95475 246 aa4.74□□□□□ -1.65
USP39-213ENST00000467885 HRASP01112 189 aa4.74□□□□□ -1.65
USP39-213ENST00000467885 IGKV1D-33P01593 117 aa4.74□□□□□ -1.65
USP39-213ENST00000467885 IGKV1-33P01594 117 aa4.74□□□□□ -1.65
USP39-213ENST00000467885 PF4P02776 101 aa4.74□□□□□ -1.65
USP39-213ENST00000467885 HOXB5P09067 269 aa4.74□□□□□ -1.65
USP39-213ENST00000467885 FBP1P09467 338 aa4.74□□□□□ -1.65
USP39-213ENST00000467885 ANXA3P12429 323 aa4.74□□□□□ -1.65
USP39-213ENST00000467885 NQO2P16083 231 aa4.74□□□□□ -1.65
USP39-213ENST00000467885 VDAC1P21796 283 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms