RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CDK10Q15131 360 aa14.56□□□□□ -0.08
COL5A1-203ENST00000460264 ACSM6Q6P461 480 aa14.56□□□□□ -0.08
COL5A1-203ENST00000460264 SRSF12Q8WXF0 261 aaKnown RBP14.56□□□□□ -0.08
COL5A1-203ENST00000460264 ACOT12Q8WYK0 555 aa14.56□□□□□ -0.08
COL5A1-203ENST00000460264 PHB2Q99623 299 aa14.56□□□□□ -0.08
COL5A1-203ENST00000460264 DCUN1D5Q9BTE7 237 aa14.56□□□□□ -0.08
COL5A1-203ENST00000460264 TINAGL1Q9GZM7 467 aaPredicted RBP14.56□□□□□ -0.08
COL5A1-203ENST00000460264 ZNF430Q9H8G1 570 aaPredicted RBP14.56□□□□□ -0.08
COL5A1-203ENST00000460264 CREBL2O60519 120 aaPredicted RBP14.55□□□□□ -0.08
COL5A1-203ENST00000460264 AADACP22760 399 aa14.55□□□□□ -0.08
COL5A1-203ENST00000460264 FCGR2CP31995 323 aa14.55□□□□□ -0.08
COL5A1-203ENST00000460264 RPS19P39019 145 aaKnown RBP14.55□□□□□ -0.08
COL5A1-203ENST00000460264 LSM3P62310 102 aaKnown RBP14.55□□□□□ -0.08
COL5A1-203ENST00000460264 DEFA5Q01523 94 aa14.55□□□□□ -0.08
COL5A1-203ENST00000460264 VAX1Q5SQQ9 334 aa14.55□□□□□ -0.08
COL5A1-203ENST00000460264 ADAD2Q8NCV1 583 aaKnown RBP14.55□□□□□ -0.08
COL5A1-203ENST00000460264 OR13F1Q8NGS4 319 aa14.55□□□□□ -0.08
COL5A1-203ENST00000460264 OR4S2Q8NH73 311 aa14.55□□□□□ -0.08
COL5A1-203ENST00000460264 TCTEX1D2Q8WW35 142 aa14.55□□□□□ -0.08
COL5A1-203ENST00000460264 SNAPC3Q92966 411 aa14.55□□□□□ -0.08
COL5A1-203ENST00000460264 COA4Q9NYJ1 87 aa14.55□□□□□ -0.08
COL5A1-203ENST00000460264 TAS2R8Q9NYW2 309 aa14.55□□□□□ -0.08
COL5A1-203ENST00000460264 DNAH9Q9NYC9 4486 aa14.54□□□□□ -0.08
COL5A1-203ENST00000460264 UBE2NLQ5JXB2 153 aa14.54□□□□□ -0.08
COL5A1-203ENST00000460264 SECTM1Q8WVN6 248 aa14.54□□□□□ -0.08
COL5A1-203ENST00000460264 GPHA2Q96T91 129 aa14.54□□□□□ -0.08
COL5A1-203ENST00000460264 ANKRD34BA5PLL1 514 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 TRIM64CA6NLI5 447 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 MPPED1O15442 326 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 XRCC3O43542 346 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 LY86O95711 162 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 PPYP01298 95 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 FCER2P06734 321 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 ZP3P21754 424 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 CBX5P45973 191 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 BRWD1-AS2P59051 145 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 DYRK1AQ13627 763 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 MSMO1Q15800 293 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 C10orf55Q5SWW7 151 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 ZNF66Q6ZN08 573 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 MMD2Q8IY49 270 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 VKORC1L1Q8N0U8 176 aa14.53□□□□□ -0.08
COL5A1-203ENST00000460264 RANGRFQ9HD47 186 aaPredicted RBP14.53□□□□□ -0.08
COL5A1-203ENST00000460264 MEIS3P1A6NDR6 274 aa14.52□□□□□ -0.09
COL5A1-203ENST00000460264 RBMXL2O75526 392 aaKnown RBP14.52□□□□□ -0.09
COL5A1-203ENST00000460264 ACTL6BO94805 426 aa14.52□□□□□ -0.09
COL5A1-203ENST00000460264 OR9G9P0C7N8 305 aa14.52□□□□□ -0.09
COL5A1-203ENST00000460264 MFSD4AQ8N468 514 aa14.52□□□□□ -0.09
COL5A1-203ENST00000460264 SAMD12Q8N8I0 201 aa14.52□□□□□ -0.09
COL5A1-203ENST00000460264 OR5AP2Q8NGF4 316 aa14.52□□□□□ -0.09
COL5A1-203ENST00000460264 S100A16Q96FQ6 103 aaKnown RBP14.52□□□□□ -0.09
COL5A1-203ENST00000460264 USMG5Q96IX5 58 aa14.52□□□□□ -0.09
COL5A1-203ENST00000460264 CCL28Q9NRJ3 127 aa14.52□□□□□ -0.09
COL5A1-203ENST00000460264 TNFSF12O43508 249 aa14.51□□□□□ -0.09
COL5A1-203ENST00000460264 KBTBD11O94819 623 aa14.51□□□□□ -0.09
COL5A1-203ENST00000460264 SPNP16150 400 aa14.51□□□□□ -0.09
COL5A1-203ENST00000460264 ZNF343Q6P1L6 599 aa14.51□□□□□ -0.09
COL5A1-203ENST00000460264 PUSL1Q8N0Z8 303 aaKnown RBP14.51□□□□□ -0.09
COL5A1-203ENST00000460264 OR6Q1Q8NGQ2 317 aa14.51□□□□□ -0.09
COL5A1-203ENST00000460264 VSTM2AQ8TAG5 236 aa14.51□□□□□ -0.09
COL5A1-203ENST00000460264 SPIN2AQ99865 258 aa14.51□□□□□ -0.09
COL5A1-203ENST00000460264 SPIN2BQ9BPZ2 258 aa14.51□□□□□ -0.09
COL5A1-203ENST00000460264 SLC5A7Q9GZV3 580 aa14.51□□□□□ -0.09
COL5A1-203ENST00000460264 IFT46Q9NQC8 304 aa14.51□□□□□ -0.09
COL5A1-203ENST00000460264 OR2A4O95047 310 aa14.5□□□□□ -0.09
COL5A1-203ENST00000460264 TRBV12-3P01733 135 aa14.5□□□□□ -0.09
COL5A1-203ENST00000460264 KIR2DS2P43631 304 aa14.5□□□□□ -0.09
COL5A1-203ENST00000460264 TMEM69Q5SWH9 247 aa14.5□□□□□ -0.09
COL5A1-203ENST00000460264 TMEM167AQ8TBQ9 72 aa14.5□□□□□ -0.09
COL5A1-203ENST00000460264 SLC25A46Q96AG3 418 aa14.5□□□□□ -0.09
COL5A1-203ENST00000460264 OR2A7Q96R45 310 aa14.5□□□□□ -0.09
COL5A1-203ENST00000460264 OR4C12Q96R67 309 aa14.5□□□□□ -0.09
COL5A1-203ENST00000460264 FUNDC2Q9BWH2 189 aa14.5□□□□□ -0.09
COL5A1-203ENST00000460264 ANAPC10Q9UM13 185 aa14.5□□□□□ -0.09
COL5A1-203ENST00000460264 TENM3Q9P273 2699 aa14.49□□□□□ -0.09
COL5A1-203ENST00000460264 PRH1P02810 166 aa14.49□□□□□ -0.09
COL5A1-203ENST00000460264 TAS2R20P59543 309 aa14.49□□□□□ -0.09
COL5A1-203ENST00000460264 FXYD4P59646 89 aa14.49□□□□□ -0.09
COL5A1-203ENST00000460264 NCS1P62166 190 aa14.49□□□□□ -0.09
COL5A1-203ENST00000460264 RHOGP84095 191 aa14.49□□□□□ -0.09
COL5A1-203ENST00000460264 ZNF45Q02386 682 aa14.49□□□□□ -0.09
COL5A1-203ENST00000460264 KLF5Q13887 457 aaPredicted RBP14.49□□□□□ -0.09
COL5A1-203ENST00000460264 ZBTB34Q8NCN2 500 aa14.49□□□□□ -0.09
COL5A1-203ENST00000460264 GIMAP1Q8WWP7 306 aa14.49□□□□□ -0.09
COL5A1-203ENST00000460264 KCTD12Q96CX2 325 aaKnown RBP14.49□□□□□ -0.09
COL5A1-203ENST00000460264 ELOVL1Q9BW60 279 aa14.49□□□□□ -0.09
COL5A1-203ENST00000460264 AKIP1Q9NQ31 210 aa14.49□□□□□ -0.09
COL5A1-203ENST00000460264 PEF1Q9UBV8 284 aaKnown RBP14.49□□□□□ -0.09
COL5A1-203ENST00000460264 SMAD5-AS1Q9Y6J3 95 aa14.49□□□□□ -0.09
COL5A1-203ENST00000460264 TRBV9A0A0B4J1U6 114 aa14.48□□□□□ -0.09
COL5A1-203ENST00000460264 FAM223BA6NKX1 122 aa14.48□□□□□ -0.09
COL5A1-203ENST00000460264 TEX22C9J3V5 150 aa14.48□□□□□ -0.09
COL5A1-203ENST00000460264 HRASP01112 189 aa14.48□□□□□ -0.09
COL5A1-203ENST00000460264 NHLRC4P0CG21 123 aaPredicted RBP14.48□□□□□ -0.09
COL5A1-203ENST00000460264 GP9P14770 177 aa14.48□□□□□ -0.09
COL5A1-203ENST00000460264 HAPLN4Q86UW8 402 aa14.48□□□□□ -0.09
COL5A1-203ENST00000460264 TMEM17Q86X19 198 aa14.48□□□□□ -0.09
COL5A1-203ENST00000460264 FAM223AQ8IWN6 122 aa14.48□□□□□ -0.09
COL5A1-203ENST00000460264 TTC9CQ8N5M4 171 aa14.48□□□□□ -0.09
COL5A1-203ENST00000460264 EHFQ9NZC4 300 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms