RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PLGRKTQ9HBL7 147 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 RDH8Q9NYR8 311 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF230Q9UIE0 474 aaPredicted RBP3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF221Q9UK13 617 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 KCNK7Q9Y2U2 307 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 LSM2Q9Y333 95 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 NBEAL2Q6ZNJ1 2754 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 TENM2Q9NT68 2774 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 TRBV6-6A0A0A6YYG2 114 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 A0A0B4J203 849 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 TMEM272A0A1B0GTI8 110 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 MSGN1A6NI15 193 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 FOXI3A8MTJ6 420 aaPredicted RBP3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 TRDCB7Z8K6 153 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 C3orf84H3BNL1 204 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 SLC17A2O00624 439 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 ITGB1BP1O14713 200 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 CASQ2O14958 399 aaPredicted RBP3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 BET1O15155 118 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 DENRO43583 198 aaKnown RBP3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 RBMXL2O75526 392 aaKnown RBP3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 IGLV2-23P01705 113 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 TRBV12-3P01733 135 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 MBPP02686 304 aaPredicted RBP3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 PRH1P02810 166 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 TFAP2AP05549 437 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 CRYGBP07316 175 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 HNRNPCP07910 306 aaKnown RBP eCLIP3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 OR8U9P0C7N5 309 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 IGHV4-30-4P0DP06 118 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 GNB3P16520 340 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 CRIP2P52943 208 aaPredicted RBP3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 OR10A3P58181 314 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 HLA-DRB3P79483 266 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 SSBP2P81877 361 aaPredicted RBP3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 PITPNAQ00169 270 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 FABP5Q01469 135 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 IRF3Q14653 427 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 RAB11BQ15907 218 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 MRGPRG-AS1Q2M3A8 158 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 HES5Q5TA89 166 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 RNLSQ5VYX0 342 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 CD200R1LQ6Q8B3 271 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 OR6M1Q8NGM8 313 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 OR6Q1Q8NGQ2 317 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 UFD1Q92890 307 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 PTX4Q96A99 478 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 FAM3DQ96BQ1 224 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 FLYWCH2Q96CP2 140 aaKnown RBP3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 C5orf30Q96GV9 206 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 RNF5Q99942 180 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 URM1Q9BTM9 101 aaKnown RBP3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 CCDC90BQ9GZT6 254 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 RIMS4Q9H426 269 aaPredicted RBP3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 PLEKHA2Q9HB19 425 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 C8orf4Q9NR00 106 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 SLC35D1Q9NTN3 355 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 SDHAF2Q9NX18 166 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 SCN3BQ9NY72 215 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 ELF5Q9UKW6 265 aaPredicted RBP3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 HSF4Q9ULV5 492 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 SELENOKQ9Y6D0 94 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 V9GY05 133 aa3.58□□□□□ -1.84
GTF3C3-208ENST00000455546 IGKV1D-8A0A087WSZ0 117 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 C13orf42A0A1B0GVH6 325 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 SMIM30A4D0T7 59 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 IZUMO1RA6ND01 250 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 LDLRAD4O15165 306 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 FABP7O15540 132 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 RBBP9O75884 186 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 LYL1P12980 280 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 CALRP27797 417 aaKnown RBP3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 CD40LGP29965 261 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 AQP4P55087 323 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 SYNJ2BPP57105 145 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 TPBGQ13641 420 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 KLF5Q13887 457 aaPredicted RBP3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 DGAT2L7PQ6IED9 249 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 PYHIN1Q6K0P9 492 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 FAM71F2Q6NXP2 309 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 IL34Q6ZMJ4 242 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 ADAMTSL5Q6ZMM2 481 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 IDO2Q6ZQW0 420 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 ANKRD13BQ86YJ7 626 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 TCTEX1D1Q8N7M0 179 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 POC5Q8NA72 575 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 THRSPQ92748 146 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 RAB3CQ96E17 227 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 TSNAXQ99598 290 aaKnown RBP3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 MGLLQ99685 303 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 THAP7Q9BT49 309 aaPredicted RBP3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 OR2D2Q9H210 308 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 DUSP21Q9H596 190 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 RANGRFQ9HD47 186 aaPredicted RBP3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 TPRKBQ9Y3C4 175 aa3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 RBM7Q9Y580 266 aaKnown RBP3.57□□□□□ -1.84
GTF3C3-208ENST00000455546 RYR3Q15413 4870 aa3.56□□□□□ -1.84
GTF3C3-208ENST00000455546 TRBV6-7A0A0A0MS04 114 aa3.56□□□□□ -1.84
GTF3C3-208ENST00000455546 IGLV1-51P01701 117 aa3.56□□□□□ -1.84
GTF3C3-208ENST00000455546 APOA2P02652 100 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms