RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 SPIN2AQ99865 258 aa12.66□□□□□ -0.38
UBE2D4-209ENST00000454428 SPIN2BQ9BPZ2 258 aa12.66□□□□□ -0.38
UBE2D4-209ENST00000454428 FBXL7Q9UJT9 491 aa12.66□□□□□ -0.38
UBE2D4-209ENST00000454428 MGAT4AQ9UM21 535 aa12.66□□□□□ -0.38
UBE2D4-209ENST00000454428 A0A1B0GW64 132 aa12.65□□□□□ -0.38
UBE2D4-209ENST00000454428 LINC00473A8K010 186 aa12.65□□□□□ -0.38
UBE2D4-209ENST00000454428 E7EUB6 86 aa12.65□□□□□ -0.38
UBE2D4-209ENST00000454428 CRYZL1O95825 349 aa12.65□□□□□ -0.38
UBE2D4-209ENST00000454428 TMEM50BP56557 158 aa12.65□□□□□ -0.38
UBE2D4-209ENST00000454428 TAGLNQ01995 201 aaKnown RBP12.65□□□□□ -0.38
UBE2D4-209ENST00000454428 RTL8BQ17RB0 113 aa12.65□□□□□ -0.38
UBE2D4-209ENST00000454428 FAM106AQ4KMX7 169 aa12.65□□□□□ -0.38
UBE2D4-209ENST00000454428 LINC00336Q6ZUF6 198 aa12.65□□□□□ -0.38
UBE2D4-209ENST00000454428 STPG3Q8N7X2 389 aa12.65□□□□□ -0.38
UBE2D4-209ENST00000454428 C12orf4Q9NQ89 552 aa12.65□□□□□ -0.38
UBE2D4-209ENST00000454428 APLNQ9ULZ1 77 aa12.65□□□□□ -0.38
UBE2D4-209ENST00000454428 ZNF257Q9Y2Q1 563 aa12.65□□□□□ -0.38
UBE2D4-209ENST00000454428 SAA1P0DJI8 122 aaPredicted RBP12.64□□□□□ -0.39
UBE2D4-209ENST00000454428 CD37P11049 281 aa12.64□□□□□ -0.39
UBE2D4-209ENST00000454428 RPL35AP18077 110 aaKnown RBP12.64□□□□□ -0.39
UBE2D4-209ENST00000454428 MYL12AP19105 171 aa12.64□□□□□ -0.39
UBE2D4-209ENST00000454428 IGSF11Q5DX21 431 aa12.64□□□□□ -0.39
UBE2D4-209ENST00000454428 FAM89BQ8N5H3 189 aa12.64□□□□□ -0.39
UBE2D4-209ENST00000454428 MAP6D1Q9H9H5 199 aa12.64□□□□□ -0.39
UBE2D4-209ENST00000454428 FBXL17Q9UF56 701 aa12.64□□□□□ -0.39
UBE2D4-209ENST00000454428 TRDCB7Z8K6 153 aa12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 IL6RP08887 468 aaPredicted RBP12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 RRASP10301 218 aa12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 DUTP33316 252 aaKnown RBP12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 CBX3Q13185 183 aa12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 CDK10Q15131 360 aa12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 RBMS2Q15434 407 aaKnown RBP12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 KLK9Q2XQG4 91 aa12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 ZNF585BQ52M93 769 aa12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 GLT8D1Q68CQ7 371 aa12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 OR4A47Q6IF82 309 aa12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 RBPMS2Q6ZRY4 209 aaKnown RBP12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 GVQW1Q8N7I0 195 aa12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 C11orf45Q8TAV5 145 aa12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 C2CD4CQ8TF44 421 aa12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 SPAG8Q99932 426 aaPredicted RBP12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 KLK9Q9UKQ9 250 aa12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 HSF4Q9ULV5 492 aa12.63□□□□□ -0.39
UBE2D4-209ENST00000454428 NPIPB5A8MRT5 1133 aa12.62□□□□□ -0.39
UBE2D4-209ENST00000454428 CD1AP06126 327 aa12.62□□□□□ -0.39
UBE2D4-209ENST00000454428 CELP19835 753 aa12.62□□□□□ -0.39
UBE2D4-209ENST00000454428 MAP2K4P45985 399 aa12.62□□□□□ -0.39
UBE2D4-209ENST00000454428 SLC25A42Q86VD7 318 aa12.62□□□□□ -0.39
UBE2D4-209ENST00000454428 MMD2Q8IY49 270 aa12.62□□□□□ -0.39
UBE2D4-209ENST00000454428 OR4A4PQ8NGN8 299 aa12.62□□□□□ -0.39
UBE2D4-209ENST00000454428 OSR1Q8TAX0 266 aaPredicted RBP12.62□□□□□ -0.39
UBE2D4-209ENST00000454428 TMEM80Q96HE8 168 aa12.62□□□□□ -0.39
UBE2D4-209ENST00000454428 ARHGAP5-AS1Q96IT6 56 aa12.62□□□□□ -0.39
UBE2D4-209ENST00000454428 CABLES2Q9BTV7 478 aa12.62□□□□□ -0.39
UBE2D4-209ENST00000454428 C5orf66Q9H5L9 145 aa12.62□□□□□ -0.39
UBE2D4-209ENST00000454428 APOBP04114 4563 aaKnown RBP12.62□□□□□ -0.39
UBE2D4-209ENST00000454428 TRBV6-7A0A0A0MS04 114 aa12.61□□□□□ -0.39
UBE2D4-209ENST00000454428 TSPAN4O14817 238 aa12.61□□□□□ -0.39
UBE2D4-209ENST00000454428 BET1O15155 118 aa12.61□□□□□ -0.39
UBE2D4-209ENST00000454428 SERPINB10P48595 397 aa12.61□□□□□ -0.39
UBE2D4-209ENST00000454428 TCTAP57738 103 aa12.61□□□□□ -0.39
UBE2D4-209ENST00000454428 SLC38A6Q8IZM9 456 aa12.61□□□□□ -0.39
UBE2D4-209ENST00000454428 SETD9Q8NE22 299 aa12.61□□□□□ -0.39
UBE2D4-209ENST00000454428 MARC2Q969Z3 335 aa12.61□□□□□ -0.39
UBE2D4-209ENST00000454428 CMSS1Q9BQ75 279 aaKnown RBP12.61□□□□□ -0.39
UBE2D4-209ENST00000454428 PECRQ9BY49 303 aa12.61□□□□□ -0.39
UBE2D4-209ENST00000454428 MFFQ9GZY8 342 aa12.61□□□□□ -0.39
UBE2D4-209ENST00000454428 C11orf68Q9H3H3 251 aaKnown RBP12.61□□□□□ -0.39
UBE2D4-209ENST00000454428 MRPL27Q9P0M9 148 aaKnown RBP12.61□□□□□ -0.39
UBE2D4-209ENST00000454428 IRGMA1A4Y4 181 aa12.6□□□□□ -0.39
UBE2D4-209ENST00000454428 MFSD2BA6NFX1 497 aa12.6□□□□□ -0.39
UBE2D4-209ENST00000454428 FABP7O15540 132 aa12.6□□□□□ -0.39
UBE2D4-209ENST00000454428 ACTL6BO94805 426 aa12.6□□□□□ -0.39
UBE2D4-209ENST00000454428 BPNT1O95861 308 aa12.6□□□□□ -0.39
UBE2D4-209ENST00000454428 IFNA4P05014 189 aa12.6□□□□□ -0.39
UBE2D4-209ENST00000454428 CLEC3BP05452 202 aa12.6□□□□□ -0.39
UBE2D4-209ENST00000454428 CRYGCP07315 174 aa12.6□□□□□ -0.39
UBE2D4-209ENST00000454428 AREGP15514 252 aa12.6□□□□□ -0.39
UBE2D4-209ENST00000454428 TAS2R43P59537 309 aa12.6□□□□□ -0.39
UBE2D4-209ENST00000454428 PLAC9Q5JTB6 97 aa12.6□□□□□ -0.39
UBE2D4-209ENST00000454428 IGHV3-35A0A0C4DH35 117 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 XRCC3O43542 346 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 ZNF735P0CB33 412 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 GSTT2P0CG29 244 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 GSTT2BP0CG30 244 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 GALP22466 123 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 MAPK3P27361 379 aaPredicted RBP12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 PSMB6P28072 239 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 TPBGQ13641 420 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 TTC23Q5W5X9 447 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 VKORC1L1Q8N0U8 176 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 OR5B3Q8NH48 314 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 EEF1AKMT3Q96AZ1 226 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 GALNT14Q96FL9 552 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 ADTRPQ96IZ2 230 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 FYTTD1Q96QD9 318 aaKnown RBP12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 GFI1Q99684 422 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 RARRES2Q99969 163 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 SLC2A9Q9NRM0 540 aa12.59□□□□□ -0.39
UBE2D4-209ENST00000454428 KCNK7Q9Y2U2 307 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms