RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 TAS2R8Q9NYW2 309 aa12.63□□□□□ -0.39
NCKIPSD-208ENST00000454134 PRELID3BQ9Y3B1 194 aa12.63□□□□□ -0.39
NCKIPSD-208ENST00000454134 MPPED1O15442 326 aa12.62□□□□□ -0.39
NCKIPSD-208ENST00000454134 SLC22A5O76082 557 aa12.62□□□□□ -0.39
NCKIPSD-208ENST00000454134 TRBV12-3P01733 135 aa12.62□□□□□ -0.39
NCKIPSD-208ENST00000454134 AADACP22760 399 aa12.62□□□□□ -0.39
NCKIPSD-208ENST00000454134 LSM3P62310 102 aaKnown RBP12.62□□□□□ -0.39
NCKIPSD-208ENST00000454134 EIF4EBP1Q13541 118 aaPredicted RBP12.62□□□□□ -0.39
NCKIPSD-208ENST00000454134 CDK10Q15131 360 aa12.62□□□□□ -0.39
NCKIPSD-208ENST00000454134 OVCH2Q7RTZ1 564 aa12.62□□□□□ -0.39
NCKIPSD-208ENST00000454134 ADAD2Q8NCV1 583 aaKnown RBP12.62□□□□□ -0.39
NCKIPSD-208ENST00000454134 OR4C12Q96R67 309 aa12.62□□□□□ -0.39
NCKIPSD-208ENST00000454134 AUNIPQ9H7T9 357 aa12.62□□□□□ -0.39
NCKIPSD-208ENST00000454134 MRPS7Q9Y2R9 242 aaKnown RBP12.62□□□□□ -0.39
NCKIPSD-208ENST00000454134 TNCP24821 2201 aa12.62□□□□□ -0.39
NCKIPSD-208ENST00000454134 SORL1Q92673 2214 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 MEIS3P1A6NDR6 274 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 ACTL6BO94805 426 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 PRH1P02810 166 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 OR9G9P0C7N8 305 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 FCGR2CP31995 323 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 BRWD1-AS2P59051 145 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 DYRK1AQ13627 763 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 HOGA1Q86XE5 327 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 OR6Q1Q8NGQ2 317 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 SECTM1Q8WVN6 248 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 HSD17B10Q99714 261 aaKnown RBP12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 RSRP1Q9BUV0 290 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 DIABLOQ9NR28 239 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 CCL28Q9NRJ3 127 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 ADAM30Q9UKF2 790 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 SMAD5-AS1Q9Y6J3 95 aa12.61□□□□□ -0.39
NCKIPSD-208ENST00000454134 A0A0A6YYH2 397 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 A6NJ64 397 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 TNFSF12O43508 249 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 AIREO43918 545 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 BRI3O95415 125 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 NHLRC4P0CG21 123 aaPredicted RBP12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 GP9P14770 177 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 ZP3P21754 424 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 RPS19P39019 145 aaKnown RBP12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 TIMM50Q3ZCQ8 353 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 ZNF343Q6P1L6 599 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 MMD2Q8IY49 270 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 MFSD4AQ8N468 514 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 TSPAN14Q8NG11 270 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 OR13F1Q8NGS4 319 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 OR4S2Q8NH73 311 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 YIPF6Q96EC8 236 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 ELOVL1Q9BW60 279 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 PEF1Q9UBV8 284 aaKnown RBP12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 U3KQK5 164 aa12.6□□□□□ -0.39
NCKIPSD-208ENST00000454134 CREBL2O60519 120 aaPredicted RBP12.59□□□□□ -0.39
NCKIPSD-208ENST00000454134 SYNJ2BPP57105 145 aa12.59□□□□□ -0.39
NCKIPSD-208ENST00000454134 RHOGP84095 191 aa12.59□□□□□ -0.39
NCKIPSD-208ENST00000454134 KLF5Q13887 457 aaPredicted RBP12.59□□□□□ -0.39
NCKIPSD-208ENST00000454134 SNAPC3Q92966 411 aa12.59□□□□□ -0.39
NCKIPSD-208ENST00000454134 USMG5Q96IX5 58 aa12.59□□□□□ -0.39
NCKIPSD-208ENST00000454134 WWC2-AS2Q96NR7 200 aa12.59□□□□□ -0.39
NCKIPSD-208ENST00000454134 SPIN2AQ99865 258 aa12.59□□□□□ -0.39
NCKIPSD-208ENST00000454134 SPIN2BQ9BPZ2 258 aa12.59□□□□□ -0.39
NCKIPSD-208ENST00000454134 A0A087WXM4 84 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 HMX3A6NHT5 357 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 TRIM64CA6NLI5 447 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 OR2A4O95047 310 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 PPYP01298 95 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 FXYD4P59646 89 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 ZNF45Q02386 682 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 ZNF66Q6ZN08 573 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 SSX9Q7RTT3 188 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 ANKRD13BQ86YJ7 626 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 OR2A7Q96R45 310 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 SLC5A7Q9GZV3 580 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 VCX3AQ9NNX9 186 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 AKIP1Q9NQ31 210 aa12.58□□□□□ -0.4
NCKIPSD-208ENST00000454134 E7EUB6 86 aa12.57□□□□□ -0.4
NCKIPSD-208ENST00000454134 XRCC3O43542 346 aa12.57□□□□□ -0.4
NCKIPSD-208ENST00000454134 KBTBD11O94819 623 aa12.57□□□□□ -0.4
NCKIPSD-208ENST00000454134 TNFAIP8O95379 198 aa12.57□□□□□ -0.4
NCKIPSD-208ENST00000454134 IGLV1-51P01701 117 aa12.57□□□□□ -0.4
NCKIPSD-208ENST00000454134 IL34Q6ZMJ4 242 aa12.57□□□□□ -0.4
NCKIPSD-208ENST00000454134 C19orf35Q6ZS72 473 aa12.57□□□□□ -0.4
NCKIPSD-208ENST00000454134 CROCCP3Q8IVE0 287 aa12.57□□□□□ -0.4
NCKIPSD-208ENST00000454134 PUSL1Q8N0Z8 303 aaKnown RBP12.57□□□□□ -0.4
NCKIPSD-208ENST00000454134 SAMD12Q8N8I0 201 aa12.57□□□□□ -0.4
NCKIPSD-208ENST00000454134 OR9G4Q8NGQ1 327 aa12.57□□□□□ -0.4
NCKIPSD-208ENST00000454134 S100A16Q96FQ6 103 aaKnown RBP12.57□□□□□ -0.4
NCKIPSD-208ENST00000454134 FYTTD1Q96QD9 318 aaKnown RBP12.57□□□□□ -0.4
NCKIPSD-208ENST00000454134 TEX22C9J3V5 150 aa12.56□□□□□ -0.4
NCKIPSD-208ENST00000454134 SULT1C2O00338 296 aa12.56□□□□□ -0.4
NCKIPSD-208ENST00000454134 TMEM127O75204 238 aa12.56□□□□□ -0.4
NCKIPSD-208ENST00000454134 MYOD1P15172 320 aa12.56□□□□□ -0.4
NCKIPSD-208ENST00000454134 CBX5P45973 191 aa12.56□□□□□ -0.4
NCKIPSD-208ENST00000454134 ATP5G2Q06055 141 aa12.56□□□□□ -0.4
NCKIPSD-208ENST00000454134 EXOSC2Q13868 293 aaKnown RBP12.56□□□□□ -0.4
NCKIPSD-208ENST00000454134 UBE2NLQ5JXB2 153 aa12.56□□□□□ -0.4
NCKIPSD-208ENST00000454134 SBSPONQ8IVN8 264 aa12.56□□□□□ -0.4
NCKIPSD-208ENST00000454134 TTC9CQ8N5M4 171 aa12.56□□□□□ -0.4
NCKIPSD-208ENST00000454134 OR5AP2Q8NGF4 316 aa12.56□□□□□ -0.4
NCKIPSD-208ENST00000454134 VSTM2AQ8TAG5 236 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms