RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 SPINK9Q5DT21 86 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 MRPL43Q8N983 215 aaKnown RBP15.63■□□□□ 0.09
PTPA-223ENST00000452489 IL1F10Q8WWZ1 152 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 ZDHHC16Q969W1 377 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 ST20Q9HBF5 79 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 OR1A1Q9P1Q5 309 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 CHD7Q9P2D1 2997 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 ZNF407Q9C0G0 2248 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 PPIAL4EA0A075B759 164 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 PPIAL4CA0A0B4J2A2 164 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 MANSC4A6NHS7 340 aaPredicted RBP15.63■□□□□ 0.09
PTPA-223ENST00000452489 PPIAL4DF5H284 164 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 AMY1AP04745 511 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 PPIAL4FP0DN26 164 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 BCL3P20749 454 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 PTGDSP41222 190 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 FOXL2P58012 376 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 FOXE3Q13461 319 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 ZNF776Q68DI1 518 aaPredicted RBP15.63■□□□□ 0.09
PTPA-223ENST00000452489 KIAA0895LQ68EN5 471 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 COPS7AQ9UBW8 275 aa15.63■□□□□ 0.09
PTPA-223ENST00000452489 RNASEKQ6P5S7 137 aaKnown RBP15.62■□□□□ 0.09
PTPA-223ENST00000452489 DOLPP1Q86YN1 238 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 CLDN23Q96B33 292 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 GTSF1LQ9H1H1 148 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 SMPXQ9UHP9 88 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 ZG16O60844 167 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 HAND1O96004 215 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 AZU1P20160 251 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 HHEXQ03014 270 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 C17orf67Q0P5P2 114 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 FGFRL1Q8N441 504 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 OR5A2Q8NGI9 324 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 OXGR1Q96P68 337 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 JMJD8Q96S16 334 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 NAA38Q9BRA0 125 aaKnown RBP15.62■□□□□ 0.09
PTPA-223ENST00000452489 HS3ST3A1Q9Y663 406 aa15.62■□□□□ 0.09
PTPA-223ENST00000452489 HLA-DQA1P01909 254 aa15.61■□□□□ 0.09
PTPA-223ENST00000452489 SMAGPQ0VAQ4 97 aa15.61■□□□□ 0.09
PTPA-223ENST00000452489 TMEM42Q69YG0 159 aa15.61■□□□□ 0.09
PTPA-223ENST00000452489 ZNF441Q8N8Z8 693 aa15.61■□□□□ 0.09
PTPA-223ENST00000452489 CT55Q8WUE5 264 aa15.61■□□□□ 0.09
PTPA-223ENST00000452489 ZNF837Q96EG3 531 aaPredicted RBP15.61■□□□□ 0.09
PTPA-223ENST00000452489 COMMD5Q9GZQ3 224 aa15.61■□□□□ 0.09
PTPA-223ENST00000452489 ZNF718Q3SXZ3 478 aa15.61■□□□□ 0.09
PTPA-223ENST00000452489 VWCEQ96DN2 955 aa15.61■□□□□ 0.09
PTPA-223ENST00000452489 SH2D7A6NKC9 451 aaPredicted RBP15.6■□□□□ 0.09
PTPA-223ENST00000452489 PPOXP50336 477 aa15.6■□□□□ 0.09
PTPA-223ENST00000452489 NEGR1Q7Z3B1 354 aa15.6■□□□□ 0.09
PTPA-223ENST00000452489 TMEM45BQ96B21 275 aa15.6■□□□□ 0.09
PTPA-223ENST00000452489 KCNS2Q9ULS6 477 aa15.6■□□□□ 0.09
PTPA-223ENST00000452489 SRSF7Q16629 238 aaKnown RBP eCLIP15.6■□□□□ 0.09
PTPA-223ENST00000452489 ASPHD1Q5U4P2 390 aa15.6■□□□□ 0.09
PTPA-223ENST00000452489 UBALD1Q8TB05 177 aa15.6■□□□□ 0.09
PTPA-223ENST00000452489 RAB1CQ92928 201 aa15.6■□□□□ 0.09
PTPA-223ENST00000452489 TMEM70Q9BUB7 260 aa15.6■□□□□ 0.09
PTPA-223ENST00000452489 TMEM38BQ9NVV0 291 aa15.6■□□□□ 0.09
PTPA-223ENST00000452489 CLCF1Q9UBD9 225 aa15.6■□□□□ 0.09
PTPA-223ENST00000452489 OR51B2Q9Y5P1 312 aa15.6■□□□□ 0.09
PTPA-223ENST00000452489 IGHV3-20A0A0C4DH32 117 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 A0A1B0GV72 72 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 C3orf80F5H4A9 247 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 TNFSF11O14788 317 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 CA3P07451 260 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 TMEM249Q2WGJ8 235 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 PRR31Q5SQ13 230 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 SPACA3Q8IXA5 215 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 OR2T6Q8NHC8 308 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 ULBP2Q9BZM5 246 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 WDR54Q9H977 334 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 TNFRSF19Q9NS68 423 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 PIGBOS1A0A0B4J2F0 54 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 USF1P22415 310 aaPredicted RBP15.59■□□□□ 0.09
PTPA-223ENST00000452489 CRYGSP22914 178 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 C1orf61Q13536 156 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 VWC2Q2TAL6 325 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 RHBDD2Q6NTF9 364 aa15.59■□□□□ 0.09
PTPA-223ENST00000452489 FAM90A26D6RGX4 464 aa15.58■□□□□ 0.09
PTPA-223ENST00000452489 MT-CO2P00403 227 aa15.58■□□□□ 0.09
PTPA-223ENST00000452489 CA1P00915 261 aaPredicted RBP15.58■□□□□ 0.09
PTPA-223ENST00000452489 PATE4P0C8F1 98 aa15.58■□□□□ 0.09
PTPA-223ENST00000452489 TFF2Q03403 129 aa15.58■□□□□ 0.09
PTPA-223ENST00000452489 SCGB2A2Q13296 93 aa15.58■□□□□ 0.09
PTPA-223ENST00000452489 LINC00173Q6ZV60 143 aa15.58■□□□□ 0.09
PTPA-223ENST00000452489 CPT1CQ8TCG5 803 aa15.58■□□□□ 0.09
PTPA-223ENST00000452489 C9JCJ5 164 aa15.58■□□□□ 0.08
PTPA-223ENST00000452489 TLX3O43711 291 aaPredicted RBP15.58■□□□□ 0.08
PTPA-223ENST00000452489 GDF1P27539 372 aa15.58■□□□□ 0.08
PTPA-223ENST00000452489 G6PCP35575 357 aa15.58■□□□□ 0.08
PTPA-223ENST00000452489 RPL8P62917 257 aaKnown RBP15.58■□□□□ 0.08
PTPA-223ENST00000452489 CENPWQ5EE01 88 aa15.58■□□□□ 0.08
PTPA-223ENST00000452489 GTF2H5Q6ZYL4 71 aa15.58■□□□□ 0.08
PTPA-223ENST00000452489 TXNDC17Q9BRA2 123 aa15.58■□□□□ 0.08
PTPA-223ENST00000452489 THYN1Q9P016 225 aa15.58■□□□□ 0.08
PTPA-223ENST00000452489 CGAP01215 116 aa15.57■□□□□ 0.08
PTPA-223ENST00000452489 STAG3L2P0CL84 134 aa15.57■□□□□ 0.08
PTPA-223ENST00000452489 STAG3L3P0CL85 134 aa15.57■□□□□ 0.08
PTPA-223ENST00000452489 MGST1P10620 155 aaKnown RBP15.57■□□□□ 0.08
PTPA-223ENST00000452489 CRYBB3P26998 211 aa15.57■□□□□ 0.08
PTPA-223ENST00000452489 UQCRFS1P47985 274 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms