RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	FAM174A	Q8TBP5	190 aa		5.74	□□□□□ -1.49
TRIM6-205	ENST00000445329	ZNF721	Q8TF20	911 aa		5.74	□□□□□ -1.49
TRIM6-205	ENST00000445329	UBE2E3	Q969T4	207 aa		5.74	□□□□□ -1.49
TRIM6-205	ENST00000445329	FAM3D	Q96BQ1	224 aa		5.74	□□□□□ -1.49
TRIM6-205	ENST00000445329	NEURL3	Q96EH8	262 aa		5.74	□□□□□ -1.49
TRIM6-205	ENST00000445329	VGLL1	Q99990	258 aa		5.74	□□□□□ -1.49
TRIM6-205	ENST00000445329	AGMAT	Q9BSE5	352 aa		5.74	□□□□□ -1.49
TRIM6-205	ENST00000445329	MAP1LC3A	Q9H492	121 aa		5.74	□□□□□ -1.49
TRIM6-205	ENST00000445329	ELOVL3	Q9HB03	270 aa		5.74	□□□□□ -1.49
TRIM6-205	ENST00000445329	SPANXA1	Q9NS26	97 aa		5.74	□□□□□ -1.49
TRIM6-205	ENST00000445329	DOCK11	Q5JSL3	2073 aa		5.74	□□□□□ -1.49
TRIM6-205	ENST00000445329		A0A087WV48	116 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329		C9JAW5	83 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	HLA-DRB1	P01911	266 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	REG1A	P05451	166 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	TACSTD2	P09758	323 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	CRYBB3	P26998	211 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	NTF4	P34130	210 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	SGSH	P51688	502 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	UBE2G1	P62253	170 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	MZT1	Q08AG7	82 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	MYBPH	Q13203	477 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	SP5	Q6BEB4	398 aa	Predicted RBP	5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	BPIFA4P	Q86YQ2	179 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	DOK4	Q8TEW6	326 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	KIR2DL4	Q99706	377 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	HSD17B10	Q99714	261 aa	Known RBP	5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	C1orf43	Q9BWL3	253 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	SIRPD	Q9H106	197 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	HIGD1A	Q9Y241	93 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329		A0A0C4DFX4	3053 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	MUC3A	Q02505	3323 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	DOCK9	Q9BZ29	2069 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329		J3KT08	172 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	B3GALT2	O43825	422 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	APOM	O95445	188 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	TNF	P01375	233 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	ORM1	P02763	201 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	G6PC	P35575	357 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	RBMX	P38159	391 aa	Known RBP	5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	HOGA1	Q86XE5	327 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	OR2L13	Q8N349	312 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	RAB42	Q8N4Z0	105 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	NKD1	Q969G9	470 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	MMAB	Q96EY8	250 aa	Predicted RBP	5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	HEBP2	Q9Y5Z4	205 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	KIF26A	Q9ULI4	1882 aa	Predicted RBP	5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	H2BFM	P0C1H6	154 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	ZNF74	Q16587	644 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	GLYATL3	Q5SZD4	288 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	GCSAM	Q8N6F7	178 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	LRTM2	Q8N967	370 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	OVCA2	Q8WZ82	227 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	CLDN23	Q96B33	292 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	ADAT3	Q96EY9	351 aa	Predicted RBP	5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	OR4C12	Q96R67	309 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	DUSP13	Q9UII6	198 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	CCL26	Q9Y258	94 aa		5.73	□□□□□ -1.49
TRIM6-205	ENST00000445329	MYOF	Q9NZM1	2061 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	SAA2-SAA4	A0A096LPE2	208 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	TMEM8B	A6NDV4	472 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	SNURFL	B1AK76	121 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	CXorf1	O96002	111 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	IGLV3-27	P01718	113 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	CSN3	P07498	182 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	PIRT	P0C851	137 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	IFITM1	P13164	125 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	ALOX5AP	P20292	161 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	SRI	P30626	198 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	KIR2DL1	P43626	348 aa	Predicted RBP	5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	TAS2R46	P59540	309 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	FHL3	Q13643	280 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	AGER	Q15109	404 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	C3AR1	Q16581	482 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	OR5P3	Q8WZ94	311 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	SCARF2	Q96GP6	870 aa	Predicted RBP	5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	TMEM101	Q96IK0	257 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	DUX3	Q96PT4	197 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	KLF16	Q9BXK1	252 aa	Predicted RBP	5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	SCRT2	Q9NQ03	307 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	LOC102725191	A0A1B0GVB3	256 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329		A0A1W2PPI3	338 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	FAM181B	A6NEQ2	426 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	NPIPB13	A6NJU9	1138 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	NPIPB4	C9JG80	1138 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329		E9PLN8	166 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	TIMM8A	O60220	97 aa	Predicted RBP	5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	NXPH3	O95157	252 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	SP1	P08047	785 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	EWSR1	Q01844	656 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	MBNL2	Q5VZF2	373 aa	Known RBP	5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	FBXL22	Q6P050	247 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	EBLN2	Q6P2I7	272 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	OR1L4	Q8NGR5	311 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	TSKU	Q8WUA8	353 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	LINC00477	Q96M19	166 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	KXD1	Q9BQD3	176 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	CES1P1	Q9UKY3	287 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms