RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 MT-CO2P00403 227 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TGFAP01135 160 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 INSP01308 110 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 HLA-DQB2P05538 268 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 PFN1P07737 140 aaKnown RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 SRP19P09132 144 aaKnown RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ANXA4P09525 319 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 IGLC1P0CG04 106 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF705DP0CH99 300 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF705BP0CI00 300 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 SMIM10L2AP0DMW4 78 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 SMIM10L2BP0DMW5 78 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 IGLC2P0DOY2 106 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 IGLC3P0DOY3 106 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ESDP10768 282 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 AKR1C4P17516 323 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 CELP19835 753 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 GSTM3P21266 225 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 DUSP3P51452 185 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 UBE2NP61088 152 aaKnown RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 YPEL3P61236 119 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TBPL1P62380 186 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 PAFAH1B2P68402 229 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 H3F3AP84243 136 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 FAM3AP98173 230 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 SPIBQ01892 262 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 BAXQ07812 192 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 AESQ08117 197 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 RAB40BQ12829 278 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 EIF2B1Q14232 305 aaKnown RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ENDOGQ14249 297 aaKnown RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 GGTLC2Q14390 218 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ATXN7L3Q14CW9 347 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 EXOSC7Q15024 291 aaKnown RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 PDGFRLQ15198 375 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM183BQ1AE95 376 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 C18orf21Q32NC0 220 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ALKBH6Q3KRA9 238 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM176BQ3YBM2 270 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 COX19Q49B96 90 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 LRRC10Q5BKY1 277 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 CTSL3PQ5NE16 218 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 FAM27D1Q5T7N8 215 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 Q5W150 140 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM205Q6UW68 189 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ASCL4Q6XD76 172 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 RBM45Q8IUH3 476 aaKnown RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 CMTM8Q8IZV2 173 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 FAM58AQ8N1B3 248 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 C17orf78Q8N4C9 275 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 C2orf73Q8N5S3 287 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ZSCAN4Q8NAM6 433 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 C5orf17Q8NAS9 161 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 CHST4Q8NCG5 386 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 GPR32P1Q8NGA4 272 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 OR4K17Q8NGC6 315 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 OR51A2Q8NGJ7 313 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 OR4C16Q8NGL9 310 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 OR5AK3PQ8NH89 298 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 LGALS14Q8TCE9 139 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 GPR119Q8TDV5 335 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TNFAIP8L1Q8WVP5 186 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM45BQ96B21 275 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 APH1AQ96BI3 265 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 RASD2Q96D21 266 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TVP23CQ96ET8 276 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 MRAP2Q96G30 205 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 SDSLQ96GA7 329 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 C5orf30Q96GV9 206 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 HPDLQ96IR7 371 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 C12orf42Q96LP6 360 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 PRRC1Q96M27 445 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 AQP10Q96PS8 301 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 IMMP2LQ96T52 175 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ARHGDIGQ99819 225 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 GABRG3Q99928 467 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 SLC25A21Q9BQT8 299 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 DOHHQ9BU89 302 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 PBDC1Q9BVG4 233 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 DUSP16Q9BY84 665 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TCEAL2Q9H3H9 227 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 SMDT1Q9H4I9 107 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 GEMIN7Q9H840 131 aaKnown RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 WDR54Q9H977 334 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM242Q9NWH2 141 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TAS2R8Q9NYW2 309 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 COMMD9Q9P000 198 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 GALPQ9UBC7 116 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 UQCR10Q9UDW1 63 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 MTFP1Q9UDX5 166 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 SS18L2Q9UHA2 77 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 NAT8Q9UHE5 227 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 PCTPQ9UKL6 214 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 FBXW2Q9UKT8 454 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 OR51B2Q9Y5P1 312 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 CPAMD8Q8IZJ3 1885 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 COL5A1P20908 1838 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 FANCMQ8IYD8 2048 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 TRAV34A0A0B4J273 112 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 IGSF23A1L1A6 192 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms