RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 MMP9P14780 707 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 CHRNB4P30926 498 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 VAMP2P63027 116 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 IZUMO4Q1ZYL8 232 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 FAM53AQ6NSI3 398 aaPredicted RBP13.76□□□□□ -0.21
CMTM3-202ENST00000424011 TMEM252Q8N6L7 170 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 SPOCK3Q9BQ16 436 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 NBEAQ8NFP9 2946 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 POLEQ07864 2286 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 H3BQ15 152 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 SOX15O60248 233 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 PITX3O75364 302 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 ZNF16P17020 682 aaPredicted RBP13.75□□□□□ -0.21
CMTM3-202ENST00000424011 OMGP23515 440 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 CATR1Q13166 79 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 COTL1Q14019 142 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 FBXL19-AS1Q494R0 122 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 TCTEX1D1Q8N7M0 179 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 ZNRF1Q8ND25 227 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 LFNGQ8NES3 379 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 SDSLQ96GA7 329 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 FAM234AQ9H0X4 552 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 PITPNC1Q9UKF7 332 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 CHST1O43916 411 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 METTL15P1P0C7V9 234 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 STUMQ69YW2 141 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 JPT1Q9UK76 154 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 STRAPQ9Y3F4 350 aaKnown RBP13.75□□□□□ -0.21
CMTM3-202ENST00000424011 RNF115Q9Y4L5 304 aa13.75□□□□□ -0.21
CMTM3-202ENST00000424011 PKD1L2Q7Z442 2459 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 CCL21O00585 134 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 PPP1CCP36873 323 aaKnown RBP13.74□□□□□ -0.21
CMTM3-202ENST00000424011 FHITP49789 147 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 GNG10P50151 68 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 PAX9P55771 341 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 UBE2KP61086 200 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 Q6ZRM9 215 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 RCC1LQ96I51 464 aaKnown RBP13.74□□□□□ -0.21
CMTM3-202ENST00000424011 ZNF665Q9H7R5 613 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 TGOLN2O43493 480 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 C1QL1O75973 258 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 CYB5R3P00387 301 aaPredicted RBP13.74□□□□□ -0.21
CMTM3-202ENST00000424011 NPSP0C0P6 89 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 EDDM3BP56851 147 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 TLE1Q04724 770 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 ZNF585BQ52M93 769 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 TEX36Q5VZQ5 186 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 RNASE6Q93091 150 aaKnown RBP13.74□□□□□ -0.21
CMTM3-202ENST00000424011 RFNGQ9Y644 331 aa13.74□□□□□ -0.21
CMTM3-202ENST00000424011 KIAA1324LA8MWY0 1029 aaPredicted RBP13.73□□□□□ -0.21
CMTM3-202ENST00000424011 CCL8P80075 99 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 ZNF66Q6ZN08 573 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 TMEM183AQ8IXX5 376 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 C1orf87Q8N0U7 546 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 RFESDQ8TAC1 157 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 RNF150Q9ULK6 438 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 KIAA2026Q5HYC2 2103 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 YPEL1O60688 119 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 CST7O76096 145 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 IGKV1-5P01602 117 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 DYNLT3P51808 116 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 DLK1P80370 383 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 MRPS11P82912 194 aaKnown RBP13.73□□□□□ -0.21
CMTM3-202ENST00000424011 ZNF295-AS1Q8N0V1 137 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 YPEL2Q96QA6 119 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 GNG12Q9UBI6 72 aa13.73□□□□□ -0.21
CMTM3-202ENST00000424011 GCGP01275 180 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 PRH1P02810 166 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 CD3EP07766 207 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 OR5C1Q8NGR4 320 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 PLPPR2Q96GM1 343 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 HSD17B10Q99714 261 aaKnown RBP13.72□□□□□ -0.21
CMTM3-202ENST00000424011 RARRES2Q99969 163 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 SAP30LQ9HAJ7 183 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 CACNG5Q9UF02 275 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 ZNF705GA8MUZ8 300 aaPredicted RBP13.72□□□□□ -0.21
CMTM3-202ENST00000424011 SHISA9B4DS77 424 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 F2RL2O00254 374 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 DFFBO76075 338 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 AMBPP02760 352 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 EIF4EBP1Q13541 118 aaPredicted RBP13.72□□□□□ -0.21
CMTM3-202ENST00000424011 FAM201AQ5SY85 155 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 TMEM217Q8N7C4 229 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 C5orf30Q96GV9 206 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 FAM210BQ96KR6 192 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 DCTN5Q9BTE1 182 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 MS4A5Q9H3V2 200 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 LAMP3Q9UQV4 416 aa13.72□□□□□ -0.21
CMTM3-202ENST00000424011 ACACBO00763 2458 aa13.71□□□□□ -0.21
CMTM3-202ENST00000424011 TRGV10A0A0A0MS01 117 aa13.71□□□□□ -0.21
CMTM3-202ENST00000424011 TRAV38-1A0A0B4J264 116 aa13.71□□□□□ -0.21
CMTM3-202ENST00000424011 NKX6-3A6NJ46 265 aa13.71□□□□□ -0.21
CMTM3-202ENST00000424011 BPIFB3P59826 476 aa13.71□□□□□ -0.21
CMTM3-202ENST00000424011 ZNF266Q14584 549 aa13.71□□□□□ -0.21
CMTM3-202ENST00000424011 MORN2Q502X0 79 aa13.71□□□□□ -0.21
CMTM3-202ENST00000424011 TMEM182Q6ZP80 229 aaPredicted RBP13.71□□□□□ -0.21
CMTM3-202ENST00000424011 ZNF788Q6ZQV5 615 aa13.71□□□□□ -0.21
CMTM3-202ENST00000424011 THNSL2Q86YJ6 484 aa13.71□□□□□ -0.21
CMTM3-202ENST00000424011 ZNF808Q8N4W9 903 aaPredicted RBP13.71□□□□□ -0.21
CMTM3-202ENST00000424011 CALYQ9NYX4 217 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms