RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PDCD5O14737 125 aa11.21□□□□□ -0.61
RPS28-201ENST00000417088 MPPED1O15442 326 aa11.21□□□□□ -0.61
RPS28-201ENST00000417088 AIREO43918 545 aa11.21□□□□□ -0.61
RPS28-201ENST00000417088 SAA1P0DJI8 122 aaPredicted RBP11.21□□□□□ -0.61
RPS28-201ENST00000417088 RAB6AP20340 208 aa11.21□□□□□ -0.61
RPS28-201ENST00000417088 TALDO1P37837 337 aa11.21□□□□□ -0.61
RPS28-201ENST00000417088 ATP5G2Q06055 141 aa11.21□□□□□ -0.61
RPS28-201ENST00000417088 ARFRP1Q13795 201 aa11.21□□□□□ -0.61
RPS28-201ENST00000417088 SSX1Q16384 188 aa11.21□□□□□ -0.61
RPS28-201ENST00000417088 CD300EQ496F6 205 aaPredicted RBP11.21□□□□□ -0.61
RPS28-201ENST00000417088 HIPK2Q9H2X6 1198 aa11.21□□□□□ -0.61
RPS28-201ENST00000417088 PLEKHA3Q9HB20 300 aa11.21□□□□□ -0.61
RPS28-201ENST00000417088 ELF5Q9UKW6 265 aaPredicted RBP11.21□□□□□ -0.61
RPS28-201ENST00000417088 CEPT1Q9Y6K0 416 aa11.21□□□□□ -0.61
RPS28-201ENST00000417088 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.2□□□□□ -0.62
RPS28-201ENST00000417088 J3QRK9 145 aa11.2□□□□□ -0.62
RPS28-201ENST00000417088 CD81P60033 236 aa11.2□□□□□ -0.62
RPS28-201ENST00000417088 CDK10Q15131 360 aa11.2□□□□□ -0.62
RPS28-201ENST00000417088 C10orf55Q5SWW7 151 aa11.2□□□□□ -0.62
RPS28-201ENST00000417088 TTC9CQ8N5M4 171 aa11.2□□□□□ -0.62
RPS28-201ENST00000417088 SPIN2AQ99865 258 aa11.2□□□□□ -0.62
RPS28-201ENST00000417088 SPIN2BQ9BPZ2 258 aa11.2□□□□□ -0.62
RPS28-201ENST00000417088 NEURL2Q9BR09 285 aa11.2□□□□□ -0.62
RPS28-201ENST00000417088 CENPOQ9BU64 300 aa11.2□□□□□ -0.62
RPS28-201ENST00000417088 DMRT1Q9Y5R6 373 aa11.2□□□□□ -0.62
RPS28-201ENST00000417088 METTL21EPA6NDL7 271 aa11.19□□□□□ -0.62
RPS28-201ENST00000417088 ERICH4A6NGS2 130 aa11.19□□□□□ -0.62
RPS28-201ENST00000417088 FCGR3BO75015 233 aa11.19□□□□□ -0.62
RPS28-201ENST00000417088 TUSC2O75896 110 aa11.19□□□□□ -0.62
RPS28-201ENST00000417088 ACTL6BO94805 426 aa11.19□□□□□ -0.62
RPS28-201ENST00000417088 TPPPO94811 219 aa11.19□□□□□ -0.62
RPS28-201ENST00000417088 CD7P09564 240 aa11.19□□□□□ -0.62
RPS28-201ENST00000417088 DEFB114Q30KQ6 69 aa11.19□□□□□ -0.62
RPS28-201ENST00000417088 LAX1Q8IWV1 398 aa11.19□□□□□ -0.62
RPS28-201ENST00000417088 MMD2Q8IY49 270 aa11.19□□□□□ -0.62
RPS28-201ENST00000417088 ZNF645Q8N7E2 425 aa11.19□□□□□ -0.62
RPS28-201ENST00000417088 NECAP1Q8NC96 275 aa11.19□□□□□ -0.62
RPS28-201ENST00000417088 FAM110AQ9BQ89 295 aa11.19□□□□□ -0.62
RPS28-201ENST00000417088 CREBL2O60519 120 aaPredicted RBP11.18□□□□□ -0.62
RPS28-201ENST00000417088 OR2J3O76001 311 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 RAB3BP20337 219 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 EDN2P20800 178 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 DTYMKP23919 212 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 MYL9P24844 172 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 RPL30P62888 115 aaKnown RBP11.18□□□□□ -0.62
RPS28-201ENST00000417088 TBCEQ15813 527 aaPredicted RBP11.18□□□□□ -0.62
RPS28-201ENST00000417088 ZNF367Q7RTV3 350 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 NR2C2APQ86WQ0 139 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 DEFB125Q8N687 156 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 DYNLRB2Q8TF09 96 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 KCTD12Q96CX2 325 aaKnown RBP11.18□□□□□ -0.62
RPS28-201ENST00000417088 DCUN1D5Q9BTE7 237 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 ST6GALNAC5Q9BVH7 336 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 ATG5Q9H1Y0 275 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 SLC2A8Q9NY64 477 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 OR2W1Q9Y3N9 320 aa11.18□□□□□ -0.62
RPS28-201ENST00000417088 TRDV1A0A1B0GX56 115 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 RBMY1BA6NDE4 496 aaKnown RBP11.17□□□□□ -0.62
RPS28-201ENST00000417088 RBMY1EA6NEQ0 496 aaKnown RBP11.17□□□□□ -0.62
RPS28-201ENST00000417088 HMX3A6NHT5 357 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 C2orf70A6NJV1 201 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 TEX22C9J3V5 150 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 PPP5D1E7EU14 171 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 IGLV2-14P01704 120 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 HLA-AP01891 365 aaKnown RBP11.17□□□□□ -0.62
RPS28-201ENST00000417088 HLA-DQB1P01920 261 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 RBMY1DP0C7P1 496 aaKnown RBP11.17□□□□□ -0.62
RPS28-201ENST00000417088 FOLR2P14207 255 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 NFYAP23511 347 aaPredicted RBP11.17□□□□□ -0.62
RPS28-201ENST00000417088 KIR2DS2P43631 304 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 C15orf32Q32M92 178 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 CDNFQ49AH0 187 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 OR2B11Q5JQS5 317 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 C19orf35Q6ZS72 473 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 KCTD9Q7L273 389 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 SLC25A42Q86VD7 318 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 VKORC1L1Q8N0U8 176 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 WFDC10AQ9H1F0 79 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 OR51E2Q9H255 320 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 NDUFB11Q9NX14 153 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 RBMX2Q9Y388 322 aaKnown RBP11.17□□□□□ -0.62
RPS28-201ENST00000417088 PRELID3BQ9Y3B1 194 aa11.17□□□□□ -0.62
RPS28-201ENST00000417088 IGKV1D-13A0A0B4J2D9 117 aa11.16□□□□□ -0.62
RPS28-201ENST00000417088 E7EUB6 86 aa11.16□□□□□ -0.62
RPS28-201ENST00000417088 GGCTO75223 188 aaKnown RBP11.16□□□□□ -0.62
RPS28-201ENST00000417088 OR2C1O95371 312 aa11.16□□□□□ -0.62
RPS28-201ENST00000417088 IL6RP08887 468 aaPredicted RBP11.16□□□□□ -0.62
RPS28-201ENST00000417088 IGKV1-13P0DP09 117 aa11.16□□□□□ -0.62
RPS28-201ENST00000417088 ARL6IP1Q15041 203 aa11.16□□□□□ -0.62
RPS28-201ENST00000417088 FAM209BQ5JX69 171 aa11.16□□□□□ -0.62
RPS28-201ENST00000417088 HACD4Q5VWC8 232 aa11.16□□□□□ -0.62
RPS28-201ENST00000417088 IL17DQ8TAD2 202 aa11.16□□□□□ -0.62
RPS28-201ENST00000417088 SRD5A3Q9H8P0 318 aa11.16□□□□□ -0.62
RPS28-201ENST00000417088 ZC4H2Q9NQZ6 224 aa11.16□□□□□ -0.62
RPS28-201ENST00000417088 FBXL7Q9UJT9 491 aa11.16□□□□□ -0.62
RPS28-201ENST00000417088 ZNF257Q9Y2Q1 563 aa11.16□□□□□ -0.62
RPS28-201ENST00000417088 MRPS7Q9Y2R9 242 aaKnown RBP11.16□□□□□ -0.62
RPS28-201ENST00000417088 A0A1B0GW64 132 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 SMIM30A4D0T7 59 aa11.15□□□□□ -0.62
RPS28-201ENST00000417088 NPIPB5A8MRT5 1133 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms