RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 CFHR3Q02985 330 aa11.53□□□□□ -0.56
CHD1-202ENST00000414220 RNASE12Q5GAN4 147 aaKnown RBP11.53□□□□□ -0.56
CHD1-202ENST00000414220 VAX1Q5SQQ9 334 aa11.53□□□□□ -0.56
CHD1-202ENST00000414220 ZNF818PQ6ZRF7 136 aa11.53□□□□□ -0.56
CHD1-202ENST00000414220 SPAG16Q8N0X2 631 aa11.53□□□□□ -0.56
CHD1-202ENST00000414220 RNF152Q8N8N0 203 aa11.53□□□□□ -0.56
CHD1-202ENST00000414220 MINDY2Q8NBR6 621 aa11.53□□□□□ -0.56
CHD1-202ENST00000414220 LFNGQ8NES3 379 aa11.53□□□□□ -0.56
CHD1-202ENST00000414220 OR52I2Q8NH67 350 aa11.53□□□□□ -0.56
CHD1-202ENST00000414220 GRPEL2Q8TAA5 225 aa11.53□□□□□ -0.56
CHD1-202ENST00000414220 MIXL1Q9H2W2 232 aa11.53□□□□□ -0.56
CHD1-202ENST00000414220 SLA2Q9H6Q3 261 aa11.53□□□□□ -0.56
CHD1-202ENST00000414220 NUBP2Q9Y5Y2 271 aa11.53□□□□□ -0.56
CHD1-202ENST00000414220 FABP12A6NFH5 140 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 SRRM4A7MD48 611 aaKnown RBP11.52□□□□□ -0.57
CHD1-202ENST00000414220 GPR31O00270 319 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 MPPED1O15442 326 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 HPRT1P00492 218 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 CRYGBP07316 175 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 RAB9AP51151 201 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 TNXAQ16473 311 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 ARRDC1Q8N5I2 433 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 TMEM229BQ8NBD8 167 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 UBE2E2Q96LR5 201 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 ABHD1Q96SE0 405 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 GPR61Q9BZJ8 451 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 SLIRPQ9GZT3 109 aaKnown RBP11.52□□□□□ -0.57
CHD1-202ENST00000414220 ZNF355PQ9NSJ1 428 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 KLK11Q9UBX7 282 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 VSIG4Q9Y279 399 aa11.52□□□□□ -0.57
CHD1-202ENST00000414220 CTDSPLO15194 276 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 OR2A4O95047 310 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 DUS4LO95620 317 aaKnown RBP11.51□□□□□ -0.57
CHD1-202ENST00000414220 IGLV1-40P01703 118 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 SAA1P0DJI8 122 aaPredicted RBP11.51□□□□□ -0.57
CHD1-202ENST00000414220 NQO2P16083 231 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 GNRHRP30968 328 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 TAS2R31P59538 309 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 ERVK-16P61578 105 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 NDPQ00604 133 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 EIF4EBP1Q13541 118 aaPredicted RBP11.51□□□□□ -0.57
CHD1-202ENST00000414220 PRSS8Q16651 343 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 C8orf86Q6ZUL3 223 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 SLC38A6Q8IZM9 456 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 OR51H1Q8NH63 302 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 OR4A5Q8NH83 315 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 OR2A7Q96R45 310 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 SPIN2AQ99865 258 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 SPIN2BQ9BPZ2 258 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 FAM103A1Q9BTL3 118 aaKnown RBP11.51□□□□□ -0.57
CHD1-202ENST00000414220 MCRIP2Q9BUT9 160 aaKnown RBP11.51□□□□□ -0.57
CHD1-202ENST00000414220 NDUFA13Q9P0J0 144 aa11.51□□□□□ -0.57
CHD1-202ENST00000414220 FBN3Q75N90 2809 aa11.5□□□□□ -0.57
CHD1-202ENST00000414220 H3BUA1 57 aa11.5□□□□□ -0.57
CHD1-202ENST00000414220 PGLYRP1O75594 196 aaPredicted RBP11.5□□□□□ -0.57
CHD1-202ENST00000414220 RAB3DO95716 219 aa11.5□□□□□ -0.57
CHD1-202ENST00000414220 MAS1LP35410 378 aa11.5□□□□□ -0.57
CHD1-202ENST00000414220 UCP3P55916 312 aa11.5□□□□□ -0.57
CHD1-202ENST00000414220 MEF2DQ14814 521 aa11.5□□□□□ -0.57
CHD1-202ENST00000414220 WFDC9Q8NEX5 89 aa11.5□□□□□ -0.57
CHD1-202ENST00000414220 C4orf3Q8WVX3 66 aa11.5□□□□□ -0.57
CHD1-202ENST00000414220 RHOVQ96L33 236 aa11.5□□□□□ -0.57
CHD1-202ENST00000414220 NXF2Q9GZY0 626 aaKnown RBP11.5□□□□□ -0.57
CHD1-202ENST00000414220 PLEKHA2Q9HB19 425 aa11.5□□□□□ -0.57
CHD1-202ENST00000414220 TPSG1Q9NRR2 321 aa11.5□□□□□ -0.57
CHD1-202ENST00000414220 FBXO7Q9Y3I1 522 aa11.5□□□□□ -0.57
CHD1-202ENST00000414220 A0A0G2JLM5 398 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 DISC1C4P0D8 188 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 M0QYG6 137 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 CCL24O00175 119 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 ARPC1BO15143 372 aaKnown RBP11.49□□□□□ -0.57
CHD1-202ENST00000414220 CD3DP04234 171 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 RLN1P04808 185 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 EGR2P11161 476 aaPredicted RBP11.49□□□□□ -0.57
CHD1-202ENST00000414220 PGAM2P15259 253 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 F2RP25116 425 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 TNFSF8P32971 234 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 ECI1P42126 302 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 PJVKQ0ZLH3 352 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 STEAP1BQ6NZ63 245 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 IDO2Q6ZQW0 420 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 LCNL1Q6ZST4 164 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 SLC25A42Q86VD7 318 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 ZNF491Q8N8L2 437 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 DMBX1Q8NFW5 382 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 ZFAND1Q8TCF1 268 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 SMIM4Q8WVI0 70 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 SRSF12Q8WXF0 261 aaKnown RBP11.49□□□□□ -0.57
CHD1-202ENST00000414220 DPF1Q92782 380 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 ZNF486Q96H40 463 aaPredicted RBP11.49□□□□□ -0.57
CHD1-202ENST00000414220 RCC1LQ96I51 464 aaKnown RBP11.49□□□□□ -0.57
CHD1-202ENST00000414220 ZNF430Q9H8G1 570 aaPredicted RBP11.49□□□□□ -0.57
CHD1-202ENST00000414220 HRASLSQ9HDD0 168 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 COMMD9Q9P000 198 aa11.49□□□□□ -0.57
CHD1-202ENST00000414220 DPPA5A6NC42 116 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 MSGN1A6NI15 193 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 KBTBD11O94819 623 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 AKAIN1P0CW23 69 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 RAB25P57735 213 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 TPPP2P59282 170 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms