RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 MPPED1O15442 326 aa8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 CRYZL1O95825 349 aa8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 SAA1P0DJI8 122 aaPredicted RBP8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 ARL3P36405 182 aa8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 APOC4P55056 127 aa8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 PLA2G7Q13093 441 aa8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 IGSF11Q5DX21 431 aa8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 FAM89BQ8N5H3 189 aa8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 NKAIN3Q8N8D7 197 aa8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 OR1L6Q8NGR2 347 aa8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 GFI1Q99684 422 aa8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 PLEKHJ1Q9NW61 149 aa8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 FBXL17Q9UF56 701 aa8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 IGHV3-35A0A0C4DH35 117 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 KIR2DL5BA0A0G2JN68 375 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 KIR2DL5BA0A0G2JPC4 375 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 MFSD2BA6NFX1 497 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 CGB1A6NKQ9 187 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 TRDCB7Z8K6 153 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 UBE2CO00762 179 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 UBBP0CG47 229 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 MYOD1P15172 320 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 AREGP15514 252 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 SRMP19623 302 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 DUTP33316 252 aaKnown RBP8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 KLK9Q2XQG4 91 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 ZNF585BQ52M93 769 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 PLAC9Q5JTB6 97 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 KIR2DL5AQ8N109 375 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 OR2C3Q8N628 320 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 SETD9Q8NE22 299 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 KIR2DL5BQ8NHK3 375 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 ARHGAP5-AS1Q96IT6 56 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 RIMS4Q9H426 269 aaPredicted RBP8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 MAP6D1Q9H9H5 199 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 KLK9Q9UKQ9 250 aa8.72□□□□□ -1.01
SPTLC1P3-201ENST00000403408 AGRNO00468 2067 aa8.71□□□□□ -1.01
SPTLC1P3-201ENST00000403408 TRAV25A0A0B4J276 109 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 DEFB4AO15263 64 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 XRCC3O43542 346 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 GSTT2P0CG29 244 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 GSTT2BP0CG30 244 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 ANKRD55Q3KP44 614 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 VMA21Q3ZAQ7 101 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 LCE2AQ5TA79 106 aaPredicted RBP8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 VKORC1L1Q8N0U8 176 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 GVQW1Q8N7I0 195 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 STPG3Q8N7X2 389 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 ZNF414Q96IQ9 312 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 CABLES2Q9BTV7 478 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 PECRQ9BY49 303 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 KCNK7Q9Y2U2 307 aa8.71□□□□□ -1.02
SPTLC1P3-201ENST00000403408 TRBV6-7A0A0A0MS04 114 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 NPIPB5A8MRT5 1133 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 BET1O15155 118 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 CRYGCP07315 174 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 CELP19835 753 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 BRWD1-AS2P59051 145 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 RPL30P62888 115 aaKnown RBP8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 CDK10Q15131 360 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 P2RY14Q15391 338 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 RTL8BQ17RB0 113 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 FAM106AQ4KMX7 169 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 FAM209BQ5JX69 171 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 LAIR2Q6ISS4 152 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 LINC00336Q6ZUF6 198 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 APRG1Q8IVJ8 170 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 TMEM217Q8N7C4 229 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 C11orf45Q8TAV5 145 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 MAFIPQ8WZ33 124 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 TMEM80Q96HE8 168 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 SPIN2AQ99865 258 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 SPIN2BQ9BPZ2 258 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 C12orf4Q9NQ89 552 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 HSF4Q9ULV5 492 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 ZNF257Q9Y2Q1 563 aa8.7□□□□□ -1.02
SPTLC1P3-201ENST00000403408 IGKV1D-8A0A087WSZ0 117 aa8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 TSPAN4O14817 238 aa8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 FABP7O15540 132 aa8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 REG1AP05451 166 aa8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 CLEC3BP05452 202 aa8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 CD1AP06126 327 aa8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 RBMS2Q15434 407 aaKnown RBP8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 ACSM3Q53FZ2 586 aa8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 RBPMS2Q6ZRY4 209 aaKnown RBP8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 ZNF575Q86XF7 245 aa8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 OR6M1Q8NGM8 313 aa8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 OR5B3Q8NH48 314 aa8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 C2CD4CQ8TF44 421 aa8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 SPAG8Q99932 426 aaPredicted RBP8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 CMSS1Q9BQ75 279 aaKnown RBP8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 C5orf66Q9H5L9 145 aa8.69□□□□□ -1.02
SPTLC1P3-201ENST00000403408 IGLV11-55A0A075B6I3 123 aa8.68□□□□□ -1.02
SPTLC1P3-201ENST00000403408 IGLL5B9A064 214 aa8.68□□□□□ -1.02
SPTLC1P3-201ENST00000403408 BPNT1O95861 308 aa8.68□□□□□ -1.02
SPTLC1P3-201ENST00000403408 IGLV2-14P01704 120 aa8.68□□□□□ -1.02
SPTLC1P3-201ENST00000403408 ZNF735P0CB33 412 aa8.68□□□□□ -1.02
SPTLC1P3-201ENST00000403408 RRASP10301 218 aa8.68□□□□□ -1.02
SPTLC1P3-201ENST00000403408 RPA2P15927 270 aa8.68□□□□□ -1.02
SPTLC1P3-201ENST00000403408 MYL12AP19105 171 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms