RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 IGHV4-38-2P0DP08 117 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 CD79AP11912 226 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 CTLA4P16410 223 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 RAB5AP20339 215 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 USF1P22415 310 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 CRABP1P29762 137 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 HRH1P35367 487 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 GLRXP35754 106 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 GPX4P36969 197 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 CDKN2AP42771 156 aaKnown RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 HOXA1P49639 335 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 RIDAP52758 137 aaKnown RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 MFAP2P55001 183 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 DEFA1P59665 94 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 DEFA3P59666 94 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 PCBD1P61457 104 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 HIST1H3AP68431 136 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 MRPS11P82912 194 aaKnown RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 ENDOGQ14249 297 aaKnown RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 SMCO1Q147U7 214 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 HLA-DRB5Q30154 266 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 NSUN5P1Q3KNT7 163 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 HIST2H3PS2Q5TEC6 136 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 HIST2H3AQ71DI3 136 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 FAM19A5Q7Z5A7 132 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 TMEM179BQ7Z7N9 219 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 C1orf174Q8IYL3 243 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 SAMD12Q8N8I0 201 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 ZNF491Q8N8L2 437 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 OR51D1Q8NGF3 324 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 C12orf43Q96C57 262 aaKnown RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 ZMYND19Q96E35 227 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 ZNF486Q96H40 463 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 ERMAPQ96PL5 475 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 PHB2Q99623 299 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 QTRT1Q9BXR0 403 aaKnown RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 ZNF430Q9H8G1 570 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 FAM206AQ9NX38 181 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 ZNF391Q9UJN7 358 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 POU2F3Q9UKI9 436 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 BAIAP2Q9UQB8 552 aa4.25□□□□□ -1.73
HMGB3P7-201ENST00000400214 IGLV5-37A0A075B6J1 123 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 IGLV3-9A0A075B6K5 115 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 IQCMA0A1B0GVH7 501 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 H7C1C5 153 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 SOCS2O14508 198 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 EIF3GO75821 320 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 PPP1R3DO95685 299 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 OR4A8P0C604 315 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 OR5AL1P0C617 328 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 NBEAP1P0C6P0 100 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 PATE4P0C8F1 98 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 ZNF32P17041 273 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 GUCA1AP43080 201 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 RFX2P48378 723 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 PPOXP50336 477 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 OR12D2P58182 307 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 PPP1CBP62140 327 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 RPS23P62266 143 aaKnown RBP4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 LCN6P62502 163 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 PSG4Q00888 419 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 RPL18AQ02543 176 aaKnown RBP4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 PLP2Q04941 152 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 CLINT1Q14677 625 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 PABPC1L2AQ5JQF8 200 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 C6orf52Q5T4I8 152 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 TMEM42Q69YG0 159 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 IDO2Q6ZQW0 420 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 LRRC18Q8N456 261 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 SPICQ8N5J4 248 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 AQP11Q8NBQ7 271 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 SLC30A7Q8NEW0 376 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 WFDC11Q8NEX6 87 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 OR10G2Q8NGC3 310 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 OR10W1Q8NGF6 305 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 OR52L1Q8NGH7 329 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 OR8D4Q8NGM9 314 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 MAFIPQ8WZ33 124 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 FGGYQ96C11 551 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 MRAP2Q96G30 205 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 OR10C1Q96KK4 312 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 NMNAT3Q96T66 252 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 PLA2G12AQ9BZM1 189 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 OR2H1Q9GZK4 316 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 CMC2Q9NRP2 79 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 TP53TG1Q9Y2A0 90 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 FBXO7Q9Y3I1 522 aa4.24□□□□□ -1.73
HMGB3P7-201ENST00000400214 A0A096LNT2 108 aa4.23□□□□□ -1.73
HMGB3P7-201ENST00000400214 CENPVL3A0A0U1RRI6 287 aa4.23□□□□□ -1.73
HMGB3P7-201ENST00000400214 FAM240AA0A1B0GVK7 77 aa4.23□□□□□ -1.73
HMGB3P7-201ENST00000400214 OR6C6A6NF89 314 aa4.23□□□□□ -1.73
HMGB3P7-201ENST00000400214 MSGN1A6NI15 193 aa4.23□□□□□ -1.73
HMGB3P7-201ENST00000400214 GNGT2O14610 69 aa4.23□□□□□ -1.73
HMGB3P7-201ENST00000400214 TNFRSF13BO14836 293 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P7-201ENST00000400214 NDUFA2O43678 99 aa4.23□□□□□ -1.73
HMGB3P7-201ENST00000400214 SLC22A5O76082 557 aa4.23□□□□□ -1.73
HMGB3P7-201ENST00000400214 NUDT3O95989 172 aa4.23□□□□□ -1.73
HMGB3P7-201ENST00000400214 RENP00797 406 aa4.23□□□□□ -1.73
HMGB3P7-201ENST00000400214 IFNA21P01568 189 aa4.23□□□□□ -1.73
HMGB3P7-201ENST00000400214 MT-ND4P03905 459 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms