RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 CMTM3Q96MX0 182 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 SEC14L6B5MCN3 397 aa13.58□□□□□ -0.24
UPK3A-202ENST00000396082 MPPED1O15442 326 aa13.58□□□□□ -0.24
UPK3A-202ENST00000396082 TNFSF12O43508 249 aa13.58□□□□□ -0.24
UPK3A-202ENST00000396082 IGHV3-11P01762 117 aa13.58□□□□□ -0.24
UPK3A-202ENST00000396082 LGALS1P09382 135 aaKnown RBP13.58□□□□□ -0.24
UPK3A-202ENST00000396082 TAS2R46P59540 309 aa13.58□□□□□ -0.24
UPK3A-202ENST00000396082 SSBP2P81877 361 aaPredicted RBP13.58□□□□□ -0.24
UPK3A-202ENST00000396082 PRSS8Q16651 343 aa13.58□□□□□ -0.24
UPK3A-202ENST00000396082 C9orf66Q5T8R8 295 aa13.58□□□□□ -0.24
UPK3A-202ENST00000396082 MZT2AQ6P582 158 aa13.58□□□□□ -0.24
UPK3A-202ENST00000396082 TMEM17Q86X19 198 aa13.58□□□□□ -0.24
UPK3A-202ENST00000396082 MFSD4AQ8N468 514 aa13.58□□□□□ -0.24
UPK3A-202ENST00000396082 POC5Q8NA72 575 aa13.58□□□□□ -0.24
UPK3A-202ENST00000396082 OR5H2Q8NGV7 314 aa13.58□□□□□ -0.24
UPK3A-202ENST00000396082 AP3S1Q92572 193 aa13.58□□□□□ -0.24
UPK3A-202ENST00000396082 ALX4Q9H161 411 aaPredicted RBP13.58□□□□□ -0.24
UPK3A-202ENST00000396082 FAM25AB3EWG3 89 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 FAM25CB3EWG5 89 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 FAM25GB3EWG6 89 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 HPGDSO60760 199 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 APELAP0DMC3 54 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 KIR2DS2P43631 304 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 EGFEM1PQ0D2K5 195 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 CATR1Q13166 79 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 MSMO1Q15800 293 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 CTF1Q16619 201 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 SNX29P2Q8IUI4 249 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 MMD2Q8IY49 270 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 ZBTB34Q8NCN2 500 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 GIMAP1Q8WWP7 306 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 SRSF12Q8WXF0 261 aaKnown RBP13.57□□□□□ -0.24
UPK3A-202ENST00000396082 GPHA2Q96T91 129 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 COA4Q9NYJ1 87 aa13.57□□□□□ -0.24
UPK3A-202ENST00000396082 ZMAT5Q9UDW3 170 aaKnown RBP13.57□□□□□ -0.24
UPK3A-202ENST00000396082 C13orf42A0A1B0GVH6 325 aa13.56□□□□□ -0.24
UPK3A-202ENST00000396082 LINC01619G3V211 115 aa13.56□□□□□ -0.24
UPK3A-202ENST00000396082 H3BUA1 57 aa13.56□□□□□ -0.24
UPK3A-202ENST00000396082 PMP2P02689 132 aa13.56□□□□□ -0.24
UPK3A-202ENST00000396082 KRTAP10-11P60412 298 aa13.56□□□□□ -0.24
UPK3A-202ENST00000396082 VKORC1L1Q8N0U8 176 aa13.56□□□□□ -0.24
UPK3A-202ENST00000396082 VSTM2AQ8TAG5 236 aa13.56□□□□□ -0.24
UPK3A-202ENST00000396082 BORCS5Q969J3 196 aa13.56□□□□□ -0.24
UPK3A-202ENST00000396082 ZNF430Q9H8G1 570 aaPredicted RBP13.56□□□□□ -0.24
UPK3A-202ENST00000396082 MSGN1A6NI15 193 aa13.55□□□□□ -0.24
UPK3A-202ENST00000396082 HRASP01112 189 aa13.55□□□□□ -0.24
UPK3A-202ENST00000396082 ZNF182P17025 639 aaPredicted RBP13.55□□□□□ -0.24
UPK3A-202ENST00000396082 ELK1P19419 428 aa13.55□□□□□ -0.24
UPK3A-202ENST00000396082 RFX2P48378 723 aa13.55□□□□□ -0.24
UPK3A-202ENST00000396082 EIF4EBP1Q13541 118 aaPredicted RBP13.55□□□□□ -0.24
UPK3A-202ENST00000396082 ASPHD1Q5U4P2 390 aa13.55□□□□□ -0.24
UPK3A-202ENST00000396082 SPAG16Q8N0X2 631 aa13.55□□□□□ -0.24
UPK3A-202ENST00000396082 ZNF2Q9BSG1 426 aaPredicted RBP13.55□□□□□ -0.24
UPK3A-202ENST00000396082 SCPEP1Q9HB40 452 aa13.55□□□□□ -0.24
UPK3A-202ENST00000396082 ANAPC10Q9UM13 185 aa13.55□□□□□ -0.24
UPK3A-202ENST00000396082 PRKDCP78527 4128 aaKnown RBP13.54□□□□□ -0.24
UPK3A-202ENST00000396082 IGHV4OR15-8A0A075B7B6 117 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 A0A087WW49 117 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 A0A0G2JLM5 398 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 SULT1C2O00338 296 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 OR2A4O95047 310 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 HLA-DMAP28067 261 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 ALDH3B2P48448 385 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 SLURP1P55000 103 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 DGCR2P98153 550 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 DYRK1AQ13627 763 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 MRGPRG-AS1Q2M3A8 158 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 AADACL3Q5VUY0 350 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 ZNF818PQ6ZRF7 136 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 SSX9Q7RTT3 188 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 OR51H1Q8NH63 302 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 GPX8Q8TED1 209 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 DCUN1D4Q92564 292 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 OR2A7Q96R45 310 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 SPIN2AQ99865 258 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 SPIN2BQ9BPZ2 258 aa13.54□□□□□ -0.24
UPK3A-202ENST00000396082 WI2-2373I1.2A0A1W2PRP0 233 aa13.53□□□□□ -0.24
UPK3A-202ENST00000396082 K7EIL1 84 aa13.53□□□□□ -0.24
UPK3A-202ENST00000396082 OVOL1O14753 267 aa13.53□□□□□ -0.24
UPK3A-202ENST00000396082 KBTBD11O94819 623 aa13.53□□□□□ -0.24
UPK3A-202ENST00000396082 HSPB1P04792 205 aaKnown RBP13.53□□□□□ -0.24
UPK3A-202ENST00000396082 OR9G9P0C7N8 305 aa13.53□□□□□ -0.24
UPK3A-202ENST00000396082 NAT1P18440 290 aa13.53□□□□□ -0.24
UPK3A-202ENST00000396082 HRH1P35367 487 aa13.53□□□□□ -0.24
UPK3A-202ENST00000396082 DEFB121Q5J5C9 76 aa13.53□□□□□ -0.24
UPK3A-202ENST00000396082 OR6F1Q8NGZ6 308 aa13.53□□□□□ -0.24
UPK3A-202ENST00000396082 MOB3AQ96BX8 217 aa13.53□□□□□ -0.24
UPK3A-202ENST00000396082 RHOVQ96L33 236 aa13.53□□□□□ -0.24
UPK3A-202ENST00000396082 TNCP24821 2201 aa13.53□□□□□ -0.24
UPK3A-202ENST00000396082 RAMP3O60896 148 aa13.52□□□□□ -0.25
UPK3A-202ENST00000396082 RCVRNP35243 200 aa13.52□□□□□ -0.25
UPK3A-202ENST00000396082 BRWD1-AS2P59051 145 aa13.52□□□□□ -0.25
UPK3A-202ENST00000396082 TSPAN5P62079 268 aa13.52□□□□□ -0.25
UPK3A-202ENST00000396082 RNASE12Q5GAN4 147 aaKnown RBP13.52□□□□□ -0.25
UPK3A-202ENST00000396082 C10orf55Q5SWW7 151 aa13.52□□□□□ -0.25
UPK3A-202ENST00000396082 DHRS11Q6UWP2 260 aa13.52□□□□□ -0.25
UPK3A-202ENST00000396082 CLVS1Q8IUQ0 354 aaPredicted RBP13.52□□□□□ -0.25
UPK3A-202ENST00000396082 TMEM167AQ8TBQ9 72 aa13.52□□□□□ -0.25
UPK3A-202ENST00000396082 AIFM2Q9BRQ8 373 aa13.52□□□□□ -0.25
UPK3A-202ENST00000396082 TINAGL1Q9GZM7 467 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms