RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 NUDT19A8MXV4 375 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 GPR37O15354 613 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 IFNA5P01569 189 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 PRH1P02810 166 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 IGFBP2P18065 325 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 RAB5CP51148 216 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 PJVKQ0ZLH3 352 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 OR8G2PQ6IF36 304 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 OR4A47Q6IF82 309 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 UQCC3Q6UW78 93 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 IL34Q6ZMJ4 242 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 GNPNAT1Q96EK6 184 aaPredicted RBP16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 TSNAXQ99598 290 aaKnown RBP16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 STRAPQ9Y3F4 350 aaKnown RBP16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 HRASP01112 189 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 IGKV1-16P04430 117 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 CAMLGP49069 296 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 F2RL1P55085 397 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 RTL8BQ17RB0 113 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 ABHD12Q8N2K0 398 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 BPIFCQ8NFQ6 507 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 OR8B3Q8NGG8 313 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 LYPD6BQ8NI32 183 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 NEIL1Q96FI4 390 aaPredicted RBP16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 OR8B2Q96RD0 313 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 MRPL20Q9BYC9 149 aaKnown RBP16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 UBTD1Q9HAC8 227 aa16.19■□□□□ 0.18
PDLIM5-205ENST00000380180 SPCS3P61009 180 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 AKR1C1Q04828 323 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 WDR25Q64LD2 544 aaPredicted RBP16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 SLC25A24Q6NUK1 477 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 LILRB2Q8N423 598 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 OR13D1Q8NGV5 346 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 OR52E5Q8NH55 327 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 OR9G1Q8NH87 305 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 TMEM133Q9H2Q1 129 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 CDKN1AP38936 164 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 REG1BP48304 166 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 SRSF3P84103 164 aaKnown RBP16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 SLC38A11Q08AI6 406 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 ZNF616Q08AN1 781 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 DIAPH2-AS1Q14236 149 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 POU2AF1Q16633 256 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 ZNF429Q86V71 674 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 THNSL2Q86YJ6 484 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 TMEM186Q96B77 213 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 CHODLQ9H9P2 273 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 NUP50Q9UKX7 468 aa16.18■□□□□ 0.18
PDLIM5-205ENST00000380180 PPIAL4CA0A0B4J2A2 164 aa16.17■□□□□ 0.18
PDLIM5-205ENST00000380180 PMS2P5A8MQ11 134 aa16.17■□□□□ 0.18
PDLIM5-205ENST00000380180 PPIAL4GP0DN37 164 aa16.17■□□□□ 0.18
PDLIM5-205ENST00000380180 DHRS7BQ6IAN0 325 aaPredicted RBP16.17■□□□□ 0.18
PDLIM5-205ENST00000380180 ST6GALNAC6Q969X2 333 aa16.17■□□□□ 0.18
PDLIM5-205ENST00000380180 SRRM4A7MD48 611 aaKnown RBP16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 TRIM77I1YAP6 450 aa16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 DLX1P56177 255 aa16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 PDLIM3Q53GG5 364 aaPredicted RBP16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 SCGB1C1Q8TD33 95 aa16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 AKAP6Q13023 2319 aa16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 C15orf61A6NNL5 157 aa16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 UMAD1C9J7I0 102 aa16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 H0YJW9 148 aa16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 AGPAT2O15120 278 aa16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 RPS16P62249 146 aaKnown RBP16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 TAGLNQ01995 201 aaKnown RBP16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 LRRC75BQ2VPJ9 315 aa16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 OR5AN1Q8NGI8 311 aa16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 C8orf46Q8TAG6 207 aa16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 FAM213BQ8TBF2 198 aa16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 NARS2Q96I59 477 aaKnown RBP16.16■□□□□ 0.18
PDLIM5-205ENST00000380180 SPTAN1Q13813 2472 aaKnown RBP16.15■□□□□ 0.18
PDLIM5-205ENST00000380180 A0A1W2PPH5 198 aa16.15■□□□□ 0.18
PDLIM5-205ENST00000380180 A6NNC1 897 aa16.15■□□□□ 0.18
PDLIM5-205ENST00000380180 H7C2Y5 167 aa16.15■□□□□ 0.18
PDLIM5-205ENST00000380180 NDUFS7O75251 213 aa16.15■□□□□ 0.18
PDLIM5-205ENST00000380180 APOA2P02652 100 aa16.15■□□□□ 0.18
PDLIM5-205ENST00000380180 FAM71F2Q6NXP2 309 aa16.15■□□□□ 0.18
PDLIM5-205ENST00000380180 OR10P1Q8NGE3 313 aa16.15■□□□□ 0.18
PDLIM5-205ENST00000380180 RSG1Q9BU20 258 aa16.15■□□□□ 0.18
PDLIM5-205ENST00000380180 TMEM14BQ9NUH8 114 aa16.15■□□□□ 0.18
PDLIM5-205ENST00000380180 TSPAN15O95858 294 aa16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 IL6RP08887 468 aaPredicted RBP16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 ZNF137PP52743 207 aa16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 TMEM231Q9H6L2 316 aa16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 TCF19Q9Y242 345 aa16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 FOXA2Q9Y261 457 aaPredicted RBP16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 FBXO7Q9Y3I1 522 aa16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 C15orf62A8K5M9 175 aa16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 SCO1O75880 301 aa16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 VDAC2P45880 294 aaPredicted RBP16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 PRB3Q04118 309 aaPredicted RBP16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 NABP2Q9BQ15 211 aa16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 WDR61Q9GZS3 305 aaKnown RBP16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 HIPK2Q9H2X6 1198 aa16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 NARFLQ9H6Q4 476 aa16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 PATZ1Q9HBE1 687 aaKnown RBP16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 HEYLQ9NQ87 328 aaPredicted RBP16.14■□□□□ 0.17
PDLIM5-205ENST00000380180 IGHV2-26A0A0B4J1V2 119 aa16.13■□□□□ 0.17
PDLIM5-205ENST00000380180 LY86O95711 162 aa16.13■□□□□ 0.17
PDLIM5-205ENST00000380180 F12P00748 615 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms