RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 C11orf87Q6NUJ2 197 aa19.02■□□□□ 0.64
TNFRSF4-201ENST00000379236 OR6Q1Q8NGQ2 317 aa19.02■□□□□ 0.64
TNFRSF4-201ENST00000379236 OR4S2Q8NH73 311 aa19.02■□□□□ 0.64
TNFRSF4-201ENST00000379236 SRSF12Q8WXF0 261 aaKnown RBP19.02■□□□□ 0.64
TNFRSF4-201ENST00000379236 ANKRD34BA5PLL1 514 aa19.01■□□□□ 0.63
TNFRSF4-201ENST00000379236 CBX5P45973 191 aa19.01■□□□□ 0.63
TNFRSF4-201ENST00000379236 HOGA1Q86XE5 327 aa19.01■□□□□ 0.63
TNFRSF4-201ENST00000379236 MMD2Q8IY49 270 aa19.01■□□□□ 0.63
TNFRSF4-201ENST00000379236 GVQW1Q8N7I0 195 aa19.01■□□□□ 0.63
TNFRSF4-201ENST00000379236 SECTM1Q8WVN6 248 aa19.01■□□□□ 0.63
TNFRSF4-201ENST00000379236 TINAGL1Q9GZM7 467 aaPredicted RBP19.01■□□□□ 0.63
TNFRSF4-201ENST00000379236 AUNIPQ9H7T9 357 aa19.01■□□□□ 0.63
TNFRSF4-201ENST00000379236 FCGR2CP31995 323 aa19■□□□□ 0.63
TNFRSF4-201ENST00000379236 LSM3P62310 102 aaKnown RBP19■□□□□ 0.63
TNFRSF4-201ENST00000379236 ACSM6Q6P461 480 aa19■□□□□ 0.63
TNFRSF4-201ENST00000379236 OVCH2Q7RTZ1 564 aa19■□□□□ 0.63
TNFRSF4-201ENST00000379236 VSTM2AQ8TAG5 236 aa19■□□□□ 0.63
TNFRSF4-201ENST00000379236 S100A16Q96FQ6 103 aaKnown RBP19■□□□□ 0.63
TNFRSF4-201ENST00000379236 IFT46Q9NQC8 304 aa19■□□□□ 0.63
TNFRSF4-201ENST00000379236 TAS2R8Q9NYW2 309 aa19■□□□□ 0.63
TNFRSF4-201ENST00000379236 LSM4Q9Y4Z0 139 aaKnown RBP19■□□□□ 0.63
TNFRSF4-201ENST00000379236 TNCP24821 2201 aa19■□□□□ 0.63
TNFRSF4-201ENST00000379236 OR9G9P0C7N8 305 aa18.99■□□□□ 0.63
TNFRSF4-201ENST00000379236 TGFBR1P36897 503 aa18.99■□□□□ 0.63
TNFRSF4-201ENST00000379236 RPL30P62888 115 aaKnown RBP18.99■□□□□ 0.63
TNFRSF4-201ENST00000379236 UBE2NLQ5JXB2 153 aa18.99■□□□□ 0.63
TNFRSF4-201ENST00000379236 ZNF66Q6ZN08 573 aa18.99■□□□□ 0.63
TNFRSF4-201ENST00000379236 OR13F1Q8NGS4 319 aa18.99■□□□□ 0.63
TNFRSF4-201ENST00000379236 USMG5Q96IX5 58 aa18.99■□□□□ 0.63
TNFRSF4-201ENST00000379236 SPIN2AQ99865 258 aa18.99■□□□□ 0.63
TNFRSF4-201ENST00000379236 SPIN2BQ9BPZ2 258 aa18.99■□□□□ 0.63
TNFRSF4-201ENST00000379236 RSRP1Q9BUV0 290 aa18.99■□□□□ 0.63
TNFRSF4-201ENST00000379236 ZNF430Q9H8G1 570 aaPredicted RBP18.99■□□□□ 0.63
TNFRSF4-201ENST00000379236 DNAH9Q9NYC9 4486 aa18.98■□□□□ 0.63
TNFRSF4-201ENST00000379236 FCER2P06734 321 aa18.98■□□□□ 0.63
TNFRSF4-201ENST00000379236 NHLRC4P0CG21 123 aaPredicted RBP18.98■□□□□ 0.63
TNFRSF4-201ENST00000379236 KIR2DS2P43631 304 aa18.98■□□□□ 0.63
TNFRSF4-201ENST00000379236 DEFA5Q01523 94 aa18.98■□□□□ 0.63
TNFRSF4-201ENST00000379236 MFSD4AQ8N468 514 aa18.98■□□□□ 0.63
TNFRSF4-201ENST00000379236 BRI3O95415 125 aa18.97■□□□□ 0.63
TNFRSF4-201ENST00000379236 IGLV2-14P01704 120 aa18.97■□□□□ 0.63
TNFRSF4-201ENST00000379236 MRGPRG-AS1Q2M3A8 158 aa18.97■□□□□ 0.63
TNFRSF4-201ENST00000379236 YIPF6Q96EC8 236 aa18.97■□□□□ 0.63
TNFRSF4-201ENST00000379236 SMAD5-AS1Q9Y6J3 95 aa18.97■□□□□ 0.63
TNFRSF4-201ENST00000379236 MEIS3P1A6NDR6 274 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 TNFSF12O43508 249 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 XRCC3O43542 346 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 OR2A4O95047 310 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 HRASP01112 189 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 PPYP01298 95 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 PTHLHP12272 177 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 SPNP16150 400 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 RPS19P39019 145 aaKnown RBP18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 FXYD4P59646 89 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 TMEM69Q5SWH9 247 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 ANKRD13BQ86YJ7 626 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 VKORC1L1Q8N0U8 176 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 SAMD12Q8N8I0 201 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 ADAD2Q8NCV1 583 aaKnown RBP18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 OR2A7Q96R45 310 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 SLC5A7Q9GZV3 580 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 CCL28Q9NRJ3 127 aa18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 PEF1Q9UBV8 284 aaKnown RBP18.96■□□□□ 0.63
TNFRSF4-201ENST00000379236 DPPA5A6NC42 116 aa18.95■□□□□ 0.62
TNFRSF4-201ENST00000379236 KBTBD11O94819 623 aa18.95■□□□□ 0.62
TNFRSF4-201ENST00000379236 CATR1Q13166 79 aa18.95■□□□□ 0.62
TNFRSF4-201ENST00000379236 TATDN3Q17R31 274 aa18.95■□□□□ 0.62
TNFRSF4-201ENST00000379236 SLC25A42Q86VD7 318 aa18.95■□□□□ 0.62
TNFRSF4-201ENST00000379236 ZBTB34Q8NCN2 500 aa18.95■□□□□ 0.62
TNFRSF4-201ENST00000379236 OR5AP2Q8NGF4 316 aa18.95■□□□□ 0.62
TNFRSF4-201ENST00000379236 GP9P14770 177 aa18.94■□□□□ 0.62
TNFRSF4-201ENST00000379236 HERV-K104P61576 105 aa18.94■□□□□ 0.62
TNFRSF4-201ENST00000379236 MSMO1Q15800 293 aa18.94■□□□□ 0.62
TNFRSF4-201ENST00000379236 AIFM2Q9BRQ8 373 aa18.94■□□□□ 0.62
TNFRSF4-201ENST00000379236 FAM223BA6NKX1 122 aa18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 RHOGP84095 191 aa18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 EIF4EBP1Q13541 118 aaPredicted RBP18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 DYRK1AQ13627 763 aa18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 RPEL1Q2QD12 228 aa18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 C10orf55Q5SWW7 151 aa18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 ZNF343Q6P1L6 599 aa18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 SSX9Q7RTT3 188 aa18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 TMEM17Q86X19 198 aa18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 FAM223AQ8IWN6 122 aa18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 BORCS5Q969J3 196 aa18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 FYTTD1Q96QD9 318 aaKnown RBP18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 GPHA2Q96T91 129 aa18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 EHFQ9NZC4 300 aa18.93■□□□□ 0.62
TNFRSF4-201ENST00000379236 MAS1LP35410 378 aa18.92■□□□□ 0.62
TNFRSF4-201ENST00000379236 RPL27AP46776 148 aaKnown RBP18.92■□□□□ 0.62
TNFRSF4-201ENST00000379236 TAS2R20P59543 309 aa18.92■□□□□ 0.62
TNFRSF4-201ENST00000379236 ATP5G2Q06055 141 aa18.92■□□□□ 0.62
TNFRSF4-201ENST00000379236 SPAG16Q8N0X2 631 aa18.92■□□□□ 0.62
TNFRSF4-201ENST00000379236 TMEM167AQ8TBQ9 72 aa18.92■□□□□ 0.62
TNFRSF4-201ENST00000379236 SNAPC3Q92966 411 aa18.92■□□□□ 0.62
TNFRSF4-201ENST00000379236 ASCL2Q99929 193 aa18.92■□□□□ 0.62
TNFRSF4-201ENST00000379236 PRH1P02810 166 aa18.91■□□□□ 0.62
TNFRSF4-201ENST00000379236 SYNJ2BPP57105 145 aa18.91■□□□□ 0.62
TNFRSF4-201ENST00000379236 EXOSC2Q13868 293 aaKnown RBP18.91■□□□□ 0.62
TNFRSF4-201ENST00000379236 PUSL1Q8N0Z8 303 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms